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Information for unigene UN19356

FASTA Sequence
Unigene ID: UN19356Length: 1346  SNP
GGGTTCACCACAGGCTGGTTATTATAACTCGATCATCTTCTTTTTCAGCTCGATGGAAAGAGAAAAAATGTCTCCACTCTCAGATC
TCCTTAACCTCAATCTCGACACCAAGCAAATCATCGCTGAATACATATGGATAGGTGGGTCTGGAATGGACATTAGAAGCAAAGGC
AGAACGTTACCAGGACCAGTAAGTGATCCATCAAAGCTTCCGAAATGGAACTACGATGGATCCAGCACCAATCAAGCCGCCGGAGA
TGACAGTGAAGTCATTCTATATCCTCAGGCCATTTTTAAAGACCCATTCAGGAAAGGGAATAACATTCTCGTGATGTGTGATGCCT
ACACACCGAAAGGAGATCCAATCCCGACCAACAATAGGCACAAAGCCGTGAAAATCTTCGATCATCCCAATGTGAAGGCTGAAGAG
CCTTGGTTTGGGATAGAGCAAGAATACACATTACTTAAGAAAGACGTCAAGTGGCCATTAGGTTGGCCCATTGGTGGCTTTCCTGG
TCCTCAGGGACCGTACTATTGTGCGGTGGGTGCAGACAAAGCCTTTGGTCGTGACATTGTGGATGGTCACTACAAAGCTTGTCTTT
ACGCTGGTTTAAGCATAGGTGGTGCCAATGGTGAAGTCATGCCTGGACAGTGGGAGTTTCAGATCAGCCCTACTGTTGGTATTGGT
GCAGGTGATCAGTTATGGGTTGCTCGCTACATACTCGAGAGGATTACTGAGATATGCGGCGTGATTGTCTCATTTGATCCCAAACC
AATCGAGGGTGATTGGAACGGAGCAGCTGCTCATACAAACTTCAGTACAAAATCAATGAGGAAAGAAGGAGGATTAGACTTGATCA
AGAAAGCAATAGGGAAGCTTGAAGTAAAGCATAAACAACACATTGCTGCTTATGGTGAAGGCAATGAGAGGCGTCTCACTGGGAAG
CATGAAACCGCAGACATCAACAAGTTCTCTTGGGGAGTGGCGGATCGTGGAGCATCGGTGAGGGTGGGAAGAGATACGGAGAAGGA
AGGGAAAGGTTATTTTGAAGATCGAAGGCCTTCGTCTAATATGGATCCTTATCTTGTTACCTCCATGATAGCTGAAACCACCATCC
TCGGCTAAGCTTTCTTTTGAAGTTGTTGCATATGTTCTTTTGTTTCTTCATGTTTCGGTTAATTTCGGTTTGAGACTCTTTTTTTA
TTGCTAATAATTCATAGGATGGTCTTGATCCTATTGTTTGTTTATCCTGGTTCAGCTGTTAGTCTTGAGGTAATTCACTTGGAGAG
ATTAGTGTTAAAGAAAATTGAATTGGGAAAATAAGGGTTTTTAGTTTTTACTTGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM62764 glutamine synthetase, putative [Arabidopsis thaliana]18105e-200
NP_175280 glutamine synthetase cytosolic isozyme 1-5 [Arabidopsis thaliana]18052e-199
XP_002891436 hypothetical protein ARALYDRAFT_891668 [Arabidopsis lyrata subsp. lyrata]18042e-199
XP_002883089 ATGSKB6 [Arabidopsis lyrata subsp. lyrata]16465e-181
NP_188409 glutamine synthetase cytosolic isozyme 1-3 [Arabidopsis thaliana]16403e-180

Swiss-Prot top hits (Blast detail)Scoree value
Q8GXW5 Glutamine synthetase cytosolic isozyme 1-518058e-201
Q9LVI8 Glutamine synthetase cytosolic isozyme 1-316401e-181
Q43785 Glutamine synthetase nodule isozyme16103e-178
P32289 Glutamine synthetase nodule isozyme16077e-178
P51119 Glutamine synthetase cytosolic isozyme 215961e-176

TrEMBL top hits (Blast detail)Scoree value
D2D304 Glutamine synthetase16349e-180
A9PEW3 Glutamine synthetase16161e-177
A9PEY1 Glutamine synthetase16142e-177
B9GUR8 Glutamine synthetase16142e-177
A7J0Q5 Glutamine synthetase16105e-177

Arabidopsis top hits (Blast detail)Scoree value
AT1G48470.1 GLN1;5 (glutamine synthetase 1;5); glutamate-ammonia ligase18057e-202
AT3G17820.1 ATGSKB6; copper ion binding / glutamate-ammonia ligase16417e-183
AT5G37600.1 ATGSR1; copper ion binding / glutamate-ammonia ligase15933e-177
AT5G16570.1 GLN1;4; glutamate-ammonia ligase15852e-176
AT1G66200.1 ATGSR2; copper ion binding / glutamate-ammonia ligase15711e-174

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
77  30%
 
84  17%
 
104  17%
 
94  17%
 
112  9%
 
122  9%

Unigene MembersMember information