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Information for unigene UN19442
| FASTA Sequence |
| Unigene ID: UN19442 | Length: 1169 |
| SNP | ACACTTGAAGCAAAAACATTGGCTTTAGATTACTTTGGTTTCGTCATCGAACCCATACAACAATCAAAGGGGAAAAATTATACAGA
GAGATATTTTTACTTAAGATGTCTCTAAAACTCACTTTTCGCAAGTAAAGGAAAGAAGCACATTTAGAATGCAGAAATGTAGCATA
GTGCAAAACAACTATAGTGGAGGGTAGAAATAGGAAGAGACTGAAAAGCCGAGGAAGAGTAAGCCCCCAACAGTAGCGACCGTGCG
TTGTGAGATCCTTGAAGCCAGCATGCTTCCTCCTACAACCGCCAGCGATGTACAAATTGTGTGTCCTACTGATGCCCCTATCGCCA
CTCCTATAGCGTTCTTGTGCGTCGCCAAAGCTATTGTTGCAATCTGGCTACGGTCTCCCCATTCGGCTAGAAAGGTTAAGATGAAG
GACTCTAGAAATATTGGGGTACAAAATCTTGAGAAAAAGCGACGGAAGGGTGTCTTCCCTTGGCCTGACTCAAGCTTCTCCTCAAC
TTCCTCCATTTCCTTCTTCTGATTCGACTTTGAATCAGATGACCTCCAAGCAATGTAGAGAAGTCGTAGACCAAAAAATGCATAGA
GAACTGTAGCAGCGCTATTAGTGTGCTTCCTCGAAATCAAGTTTGGCACAATCCTACCAAGTCCAGTGGAAAGTATGGTCATAACA
AACAAAGCTGAAAGAGCACCAGACAAAACAGTAGCTTTCGGGTGTCTCATAGCCATCAGTGCCGCTATTATGAAAGTCTCATCGCC
AATCTCGGTGACAAGTATCATGGAGAAACTCGAAAACAAAGCATCAAAGACACCAGGGCCAGTGCCTTCGAGGTTGTTCAAACCAA
GATTGTCATCAACTCCGATTCGATCAGTGCCAATCATTCCACGACGGCCAAGCTCTTTACCAGATCGTTCAGATTCCTGCGTCTCA
TTATCAACCCCAGAAGAATCCTGCGCAGAGATGGCGGAAATGAAGATGAAGAAGAAGAAGACGAGAAGCAGGCGGCGGGTGATGAA
ACCCATGAGGTGATGCGAGAGTAGAACAGATCTGTGATTGACCGACGAATACGTTTCAATTTCTAAATCTGAGAAAGTATGAGACG
TTGGGATCTGAGAAAAAGGTTATATAAATGTACTTACGAGTTACGATTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868466 hypothetical protein ARALYDRAFT_493666 [Arabidopsis lyrata subsp. lyrata] | 1247 | 8e-135 |
| NP_568535 UPF0016 protein 3 [Arabidopsis thaliana] | 1227 | 2e-132 |
| BAB09369 transmembrane protein FT27/PFT27-like [Arabidopsis thaliana] | 1119 | 5e-120 |
| XP_002514857 pentatricopeptide repeat-containing protein, putative [Ricinus communis] | 1066 | 8e-114 |
| ACU22999 unknown [Glycine max] | 1049 | 7e-112 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P52876 UPF0016 membrane protein sll0615 | 397 | 1e-037 |
| Q9HC07 Transmembrane protein 165 | 281 | 3e-024 |
| P52875 Transmembrane protein 165 | 278 | 8e-024 |
| Q4V899 Transmembrane protein 165 | 278 | 8e-024 |
| Q10320 UPF0016 membrane protein C17G8.08c | 241 | 2e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93Y38 At5g36290 | 1227 | 1e-132 |
| Q9FG57 Transmembrane protein FT27/PFT27-like | 1119 | 4e-120 |
| B9RM88 Pentatricopeptide repeat-containing protein, putative | 1066 | 5e-114 |
| C6TJA9 Putative uncharacterized protein | 1049 | 5e-112 |
| B9IQ16 Predicted membrane protein | 1013 | 7e-108 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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