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Information for unigene UN19497

FASTA Sequence
Unigene ID: UN19497Length: 1299  SNP
TTTTTTTCTCCTGTTTTCTTTTTTCATTATTTTCTTTTATTTTATGAAATAGAAGAAAATAATTAAAAAGTGTAAAATATTATACT
AACAATAAAAGATGGGTTACATTTCGCCCTCGATAGTTGCATTTCTAGTCGCATTTGCCTTGCCCGTGGTTCTAGCCACCGATACA
GCACCGATTCCAGAAGTCAGATCCCAAATTCCCCAATGGTTCAAGACCAACGTTGCACCCTATTCCCAAAGAAAGGGAACTCTAGA
CCCTGCCCTCGATGCTGCTGAAGCTGCACGACAAATTATCACCGTTAATCCAAAAGGAGGTGCCAACTTTAAGTCAATAAACGAAG
CGATTAAGAGCATTCCGATAGGAAACAAGAAGCGTATGATCATCAAGTTGGCTCCAGGTATATACTATGAAAAGGTCACGATCGAC
ATAGGTCGACCATTCGTTACATTGCTTGCTCAACCTGGTTCACAAACGGTCTTAACTTACCACGGGACGGCCGCTAAGTACGGAAC
CGTAGAGAGTGCAACTCTTATTGTCTGGTCTGATTATTTCATGGCAGCTAACCTCATCATTAAAAATACTTCTCCTATGCCGAAAC
CAGGCTCACAAGGACAAGCTCTAGCTATGAGGATCAACGGTGATTATGCAGCTTTCTACACTTGTAGTTTCTACGGTTTTCAAGAT
ACTCTATGCGACGACAAAGGCAACCATTTTTTCAAGGACTGTTACATCGAAGGAACCTATGATTTTATCTTCGGAAGAGGAGCTTC
CTTGTACTTGAACACGAAATTACACGCTGTTGGAGACGGATTAAGAGTGATTACGGCACAAAGCAGAACAAGTAACACCGAACAAA
ATGGATACACATTCGTGCACTGCAAAATCACTGGAACCGGAACCGGAATTTATTTGGGCCGGTCTTGGATGAGCCACCCCAAAGTC
ATTTATGCTTTCACAGAGATGACCAGCGTGGTCAACCCAGCTGGCTGGAGGGAAAACTTCAACCGCGGATATGACAAGACGGTCTT
CTATGGAGAGTACAAGTGTTTTGGACCAGGGTCACACCAAGAGAAGAGAGTGCCTTACACACAAGATGTTGACCAAAACGAAGTTA
GGCCTTTCCTCACTCTTGGTTACATTAAGGGCTCCAAGTGGCTACTTCCTCCTCCTAAATACTGAGAAATTTTCTTTAAAGATAAA
ATATTGATTTGTAAAACAGTCCTTTTGGCGAAATGTTCCCCATCTTTTATGTTGTGTATTTCTTGAGTTATTAAAAATTCAATTCA
TTCCTTTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871271 pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]17173e-189
NP_196360 putative pectinesterase 50 [Arabidopsis thaliana]17121e-188
XP_002871270 pectinesterase family protein [Arabidopsis lyrata subsp. lyrata]14924e-163
NP_196359 putative pectinesterase 49 [Arabidopsis thaliana]14915e-163
XP_002871269 ATPPME1 [Arabidopsis lyrata subsp. lyrata]13266e-144

Swiss-Prot top hits (Blast detail)Scoree value
Q9LY17 Probable pectinesterase 5017125e-190
Q9LY18 Probable pectinesterase 4914912e-164
Q84WM7 Pectinesterase PPME113031e-142
Q9LY19 Probable pectinesterase 4812842e-140
Q9FKF3 Putative pectinesterase 6310987e-119

TrEMBL top hits (Blast detail)Scoree value
B9SW55 Pectinesterase10049e-107
B9HAS7 Pectinesterase9797e-104
B9NDW1 Pectinesterase9725e-103
A5BA45 Putative uncharacterized protein9672e-102
B9ICE2 Pectinesterase9662e-102

Arabidopsis top hits (Blast detail)Scoree value
AT5G07430.1 pectinesterase family protein17133e-191
AT5G07420.1 pectinesterase family protein14921e-165
AT1G69940.1 PPME1; pectinesterase13031e-143
AT5G07410.1 pectinesterase family protein12842e-141
AT5G61680.1 pectinesterase family protein10995e-120

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
108  47%
 
125  29%
 
181  6%
 
62  12%
 
91  6%

Unigene MembersMember information