Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN19639

FASTA Sequence
Unigene ID: UN19639Length: 1229 SSRSNP
GACCCACAATCTCTCTCTCTCTCTCTGCTCAAATCTTCTCTCTTCTCTGATATTTAAAAAAATATACAGTGAAATCGTAATGGCCG
TCGATCTTATGCGTTTCCCCAAGATAGATGATCAAGCGGCTATCGAAGAAGCTGCATCGCAAGGCTTACAGAGCATGGATCATCTC
ATCCGTGTCCTCTCTAACCGCTCCGACAAACACAACAACAACCTCGACTGCTCCGAGATAACCGATTACACCGTTTCCAAATTCAA
AACGGTTATCTCCCTCCTTAACCGCACAGGTCACGCCCGGTTCAGACGCGGTCCGGTTCACTCCACCCCATCTCCTCAGAAACAAC
AACAGAGTCAGATCGTTAAAATCGCTCAAACGGAGGCTCCCATAGTTTCTCAACCGACGAGACCAACGGCGGTTGCTGCCACACCG
TCGAGGATGATAGTTCATTCGAATCAGCCGAGCTTAACACTCGACTTCACTAAACCTACCATCTTCGGATCCAAGAGCTCTGAGAT
CGAATTCTCCAAGGAGAACTTCAGCGTTTCTTTGAGCTCTTCGTGCATGTCGTCGGGGATAACCGGCGACGGTAGCGTATCTAAGG
GATCCTCAATCTTCCTCACGTCGGCACAGCAGCCTGTCACTTCCTCCGGGAAGCCACCGTTGGCTGGTCAGCCCTATAGGAAAAGA
TGCCTTGAGCACGAGCACTCGCTCTCGGAGGGTTTTTCCGGCAAGATCTCTGGCTCCCCTTGCCCTTGCAAGAAACGTAGAAAAAA
TCGGATGAAGAGAACCGTGAGGGTACCGGCTATAAGTTCAAAGATCGCCGATATTCCGCCGGACGAGTATTCATGGAGGAAGTACG
GTCAAAAACCGATCAAGGGCTCACCACACCCACGTGGTTACTACAAGTGCAGTACGTTTAGAGGGTGTCCAGCGAGAAAACATGTG
GAACGAGCTTTGGATGATTCAACGATGCTTATTGTGACTTATGAAGGAGAGCACCGTCATAACCAGTCCGCGATGCAGGAGAATGT
TTCTTCTTCAGGCGTTACTGATTTGGTGTTTGCTTCGGCATGACTTTGACTTGTATTTTTTTTTTTTCTTGAGTATTAGAGGGGTT
GGTTTGTAAATCTTTTACTAAAAATATATTTTGATTAGAAACAACTAATCTGGTGAAAATGTATTTTCTATAACATATTATCCTGG
TGCATTATAAAATTAGATTATCAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867294 WRKY transcription factor 11 [Arabidopsis lyrata subsp. lyrata]13168e-143
NP_849559 putative WRKY transcription factor 11 [Arabidopsis thaliana]12405e-134
AAL24088 putative putaive DNA-binding protein [Arabidopsis thaliana]12316e-133
NP_567878 putative WRKY transcription factor 11 [Arabidopsis thaliana]12244e-132
ACQ76798 WRKY transcription factor 11 [Brassica napus]12244e-132

Swiss-Prot top hits (Blast detail)Scoree value
Q9SV15 Probable WRKY transcription factor 1112635e-138
Q9SJA8 Probable WRKY transcription factor 1711506e-125
Q32SG4 Protein WRKY14382e-042
Q9SR07 Probable WRKY transcription factor 394266e-041
Q93WU6 Probable WRKY transcription factor 744257e-041

TrEMBL top hits (Blast detail)Scoree value
C5H9Y6 WRKY transcription factor 1112243e-132
C4N0V5 WRKY11-1 transcription factor12073e-130
Q6R4S8 WRKY transcription factor 1112054e-130
Q6R4S7 WRKY transcription factor 1111948e-129
Q0WTF3 Putative uncharacterized protein At2g2457011212e-120

Arabidopsis top hits (Blast detail)Scoree value
AT4G31550.1 WRKY11; calmodulin binding / transcription factor12643e-139
AT4G31550.2 WRKY11; calmodulin binding / transcription factor12536e-138
AT2G24570.1 WRKY17; calmodulin binding / transcription factor11254e-123
AT3G04670.1 WRKY39; calmodulin binding / transcription factor4265e-042
AT5G28650.1 WRKY74; calmodulin binding / transcription factor4257e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  15%
 
114  31%
 
182  15%
 
191  8%
 
212  15%
 
201  8%
 
91  8%

Unigene MembersMember information