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Information for unigene UN19707

FASTA Sequence
Unigene ID: UN19707Length: 949  SNP
GGGACTCAGAGAAAAATGAAGAAAGGATTAAAGAAAAGAAGAAGTTAAAGGAAGAAGAGAGCGGCTTAAAACTGTGTCAACCACCA
AAAATCGCCATCTCCCGCGGGCGGTTCTCCGGCCAGAAAAAATCTGTAAAATCGAATAATAATGATAAAGCTTTGGAGATGGTACC
AGCGATGCCTGACGGTTCATCCAGTGAAAACGCAGGTCATCAGCTCCGGCTTCCTTTGGGGATTTGGCGATGTCACCGCTCAATAC
ATCACTCATTCCACTGCCAAACCTCCTCCTCCTCTTCTCCGTCTCTCCGACAAGGATAAAGAGGCAGACAAAGATGCAGAATTCAA
GGTCAACTGGAAGCGAGTAGCTATCACGAGCATGTTCGGGCTTGGCTTTGTCGGACCTGTTGGCCACTTCTGGTACGAAGGCTTGG
ATAAATTCATAAAACTGAAGCTTCGATATGTACCAAAGTCCACACGTTTTGTAGCAGCCAAAGTTGCGATGGATGGTCTTATCTTC
GGCCCCATAGATCTACTGGTTTTCTTCACATACATGGGATACGCCACGGGCAAGAACACATCTGAAGTGAAAGAAGGACTCAAGAG
GGATTTTCTCCCGGCTCTAGCTCTCGAAGGAGGAGCATGGCCGCTTCTTCAGATCGCAAACTTCAGATACGTTCCCGTGCAGTACC
AGCTTCTTTACGTCAACATCTTTTGCCTTATAGACAGCGCTTTTCTCTCGTGGGTCGACCAACAGAAGGATGCAGCTTGGAAGCAA
TGGTTCACTGCTTCGTTTCTAACGCTTAAAGAACGAGGTGGCACAGGTGGCGTTTGATTCGTTTTTCCTATGTCGTGAACTTTGAA
TGAAAACAAAACAGAGTGTAATTTGACGATTCTCAACAACGAAAGTTGCCCTTACAGATTCTTGAATCAAATTTATTATTTCGTTT
TCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885656 hypothetical protein ARALYDRAFT_479971 [Arabidopsis lyrata subsp. lyrata]11096e-119
NP_001189964 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana]9375e-099
NP_189100 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein [Arabidopsis thaliana]8462e-088
AAR20751 At3g24570 [Arabidopsis thaliana]8452e-088
BAF00872 hypothetical protein [Arabidopsis thaliana]8434e-088

Swiss-Prot top hits (Blast detail)Scoree value
Q54XX9 PXMP2/4 family protein 22033e-015
Q4IPX8 Protein SYM11782e-012
Q66GV0 Protein Mpv171674e-011
Q5TZ51 Protein Mpv171666e-011
P19258 Protein Mpv171666e-011

TrEMBL top hits (Blast detail)Scoree value
Q9LV46 Genomic DNA, chromosome 3, P1 clone: MOB248461e-088
Q6NMZ6 At3g245708452e-088
Q0WPS7 Putative uncharacterized protein At3g245708433e-088
B9RKQ0 Mpv17, putative8173e-085
B7FGV7 Putative uncharacterized protein8049e-084

Arabidopsis top hits (Blast detail)Scoree value
AT3G24570.1 peroxisomal membrane 22 kDa family protein8475e-091
AT5G43140.1 peroxisomal membrane 22 kDa family protein1827e-014
AT4G04470.1 PMP221657e-012
AT2G14860.1 peroxisomal membrane protein 22 kDa, putative1584e-011
AT4G33905.1 peroxisomal membrane protein 22 kDa, putative1495e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  21%
 
62  14%
 
101  7%
 
122  14%
 
94  29%
 
72  14%

Unigene MembersMember information