Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN19757

FASTA Sequence
Unigene ID: UN19757Length: 1404  SNP
GAACGTTGTGCTTCTTGCATTCAATAACTCAAATCAACAGCGACTGTCACTGTATGGGGATTTGATAGAGAAAATGCATTTTTATT
TACAATACAAACTTCATCATCCTTTTTAAAAAGCAGAGAGAAATAGGTAGCCAATCAAAGAGTCCTCGCTCACACAAATCACCAGC
GTTAGTTAATTTATTAAAACAAGAGCTCGCTGGTTTAACTAATGGGCGGCGGGTGAGACGGTGGCTGTAACGGTGGAGACAAGACT
GTCAACGCCACAAACGTTACGGCCTCTGCAGATTTTGTAAAAACCATTCTCACCCCAAGTCTCTCCCCACGAGTTCTTAATAATCC
AGTAAGGCTTCTCCTTGAACCTAGCCGGAGCGTAACCAGCCGATCCATAACCCACCAATAAGACACCGTGGTTGAGCCTCCTCATG
CACACGTAAGGGCACGAGACTCCTCCGATGTAAGTCTGCATATATGCGGCGTTGATGGCTACCGCGAGAGGTCCGTTCTTGACAAG
ATTCGCAGCGATCTGGTCTTCGTCGATGGAAATGACGCTGAAGTTGGAGACGGACGCAACGATCTTGGACTTGTCTAGCTTACAAG
TAGGACCGTCCTTTCCGGTGTAAGGATAGTCTTCTTCTCTCATGAGCCCTCCGGTTTTGAGTGTATACTCAAAAGCGCTGTTCATG
AGGCCACCGTTGCAACCAGAGTCGCATGAACCTGCCTCTTCTGGGTCACACTCGTGATCACAGTCGACAAGCTGTTGCTCGCTAAG
GCTGACGAGCTTGCCGGTAGCGAGGAAGTTAGCACCTTCCAGAGCTCCGGTTGCACTGAAACTCCAACAAGAACCGCAAGATCCCT
GGTTTTTGACGGGGGTAACAGCGCCACGATCTCTCCAATCAAACTCCTCGGGGAGATTCTCGGTAGGGAGGATGGGAGCCTTGTTG
GCGTCCTTGGGGAGCTTAAACCCGCCTCCTTTAACACCGAGATGCTTCTCCCTGAACTCTGACTGAGTCAGATCCGAGAACTGCGT
GACGCCGTGGCGAGCGGAGGGGTCAAGCTTCTGGTGGCGCCTCGCTCGCCTGAGGTTGGCTTTGAATACGGAGAATCTGTAGTCGT
GCTCTTGGACGGACGCGTAAGCCTTGCCGAACTTTTTCTTGAAGAGAGAGAAGTGATCTTCCGAGGACAGAGCCTTGGGCTCGGCT
CCTCCTTCAACCACCTGCCTGATCACGAGATCATCGCCGTCGGAGGAAGCGGAGACGATGACGAGGAGAAAGAGAGCGAAGACGGA
GAGAGAAAGCTTGAGACGATCCATTTGGAGTTTGAGAATGAAGAAAGCAGAGAGGGCAAGGAGATTGATTAATATAGAAGAAAGAA
AGAAACTGTCTTAATACGATTAGGTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAL60581 senescence-associated cysteine protease [Brassica oleracea]18186e-201
BAJ33785 unnamed protein product [Thellungiella halophila]17712e-195
XP_002868883 hypothetical protein ARALYDRAFT_490677 [Arabidopsis lyrata subsp. lyrata]17603e-194
NP_568052 cysteine proteinase RD19a [Arabidopsis thaliana]17301e-190
AAM65162 cysteine proteinase RD19A [Arabidopsis thaliana]17254e-190

Swiss-Prot top hits (Blast detail)Scoree value
P43296 Cysteine proteinase RD19a17304e-192
P43295 Probable cysteine proteinase A49416141e-178
P25804 Cysteine proteinase 15A13496e-148
Q10716 Cysteine proteinase 112734e-139
P04988 Cysteine proteinase 17001e-072

TrEMBL top hits (Blast detail)Scoree value
Q8W179 Senescence-associated cysteine protease18184e-201
Q0WWF3 Drought-inducible cysteine proteinase RD19A17307e-191
Q8LAT5 Cysteine proteinase RD19A17253e-190
Q058I7 At2g2143016142e-177
Q680L1 Putative cysteine proteinase16062e-176

Arabidopsis top hits (Blast detail)Scoree value
AT4G39090.1 RD19 (RESPONSIVE TO DEHYDRATION 19); cysteine-type endopeptidase/ cysteine-type peptidase17313e-193
AT2G21430.1 cysteine proteinase A494, putative / thiol protease, putative16141e-179
AT4G16190.1 cysteine proteinase, putative13371e-147
AT3G54940.2 cysteine-type endopeptidase/ cysteine-type peptidase10476e-114
AT5G60360.1 AALP (Arabidopsis aleurain-like protease); cysteine-type peptidase5692e-058

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
115  9%
 
2010  19%
 
62  4%
 
121  2%
 
103  6%
 
92  4%
 
184  8%
 
193  6%
 
81  2%
 
2122  42%

Unigene MembersMember information