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Information for unigene UN19788
| FASTA Sequence |
| Unigene ID: UN19788 | Length: 864 |
| SNP | GTGCTGAGAGACTCTTGGCTCCTCTTCTGCTTCGCTTGAAACAAAACAACGTTCGTCGTCTCCGCGATCTGGAGAAAATCGAAGGT
GGAAAGATGGGCTATATCGGAGAAACCATAGATTCAATAAAATCTATACAGATCCGTCAGCTTCTCACTCAGGCCATAAGCCTTGG
GATGATTGTGACGTCAGCTTTGATCATATGGAAAGCTTTGATGTGTGTGACTGGAAGTGAATCTCCCGTGGTTGTTGTTCTCTCCG
GAAGCATGGAACCTGGTTTCAAGAGGGGGGATATATTGTTCTTGCACATGAGTAAGGACCCGATTCGAGCTGGCGAGATTGTTGTT
TTCAATGTTGATGGTCGTGATATTCCAATTGTTCATCGTGTCATTAAGGTACACGAAAGAGACAATACAGGAGAAGTCGATGTTTT
GACAAAAGGTGACAATAACTATGGGGATGACAGACTTCTCTATGCTGAAGGTCAGCAATGGCTTCATCGACATCATATAATGGGTC
GTGCTGTCGGGTTCTTGCCTTATGTTGGATGGGTGACTATAATTATGACAGAAAAGCCTATCATCAAGTATATTCTCATAGGTGCA
TTGGGTTTACTTGTTATAACGTCCAAGGATTGAAGTCTTTTAGAGATGGGACTCTGCAAACCTTTGTGTGTTGTGTTATCATCCTT
CATGTCTTGTTATATCAACTTGGTCATTTTGTGGTTTAGACCACTTCTAAAACAGTATAATCAATCAGAAGCTAACTTTTTAATTT
TAATCGTGGAGATTAGTTTTACCCCAAAATTCTAGAGTCTTGCTTATTTATGAACAGCAATCAATATAAATGAAACAAGAATATAA
ATGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_175669 signal peptidase, endoplasmic reticulum-type [Arabidopsis thaliana] | 903 | 4e-095 |
| BAD94864 hypothetical protein [Arabidopsis thaliana] | 902 | 5e-095 |
| XP_002517614 Microsomal signal peptidase 18 kDa subunit, putative [Ricinus communis] | 881 | 1e-092 |
| XP_002303254 predicted protein [Populus trichocarpa] | 879 | 2e-092 |
| XP_002298104 predicted protein [Populus trichocarpa] | 876 | 5e-092 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9BY50 Signal peptidase complex catalytic subunit SEC11C | 535 | 8e-054 |
| Q5RC30 Signal peptidase complex catalytic subunit SEC11C | 535 | 8e-054 |
| Q9WTR7 Signal peptidase complex catalytic subunit SEC11C | 533 | 1e-053 |
| P13679 Signal peptidase complex catalytic subunit SEC11C | 532 | 2e-053 |
| Q9D8V7 Signal peptidase complex catalytic subunit SEC11C | 532 | 2e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SSR2 F6D8.18 protein | 903 | 3e-095 |
| Q570X6 Putative uncharacterized protein At1g52600 | 902 | 3e-095 |
| B9RV45 Microsomal signal peptidase 18 kDa subunit, putative | 881 | 9e-093 |
| B9GWC4 Predicted protein | 879 | 2e-092 |
| B9GKW5 Predicted protein | 876 | 3e-092 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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