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Information for unigene UN19909

FASTA Sequence
Unigene ID: UN19909Length: 1041 SSRSNP
ACGAAAAAATTTGAAATTCGTTACCAAAGATGTCAAGAAATATCCATAAATTGCTATCGATCCAACTCCGAAATTTCATGAAATAA
CAACAGCTGTTGCTAGGAAATCCACTAGAGTACAAAGTAATTTAACATCACACGAAATAACATAAAAAGAAAGCCTTCTTGAAAGA
TCTCCAGGCAGCATGTGGTCGATTAGGCTTCTTTACCAGGAGCCTTCAGCACCAGCAGTCGGATTGTTGAACGCCTTGAATTCCCA
GAATGTCTTCAATGAGTATGGCTGAAAAACCGTCACGCCTTCTTCTGTGATCTTCGCTATCTGAAGCTTGTTAATAGCAGATCTGT
CACGGTAGAGAAGCACACGCATACATTTCTCAAGGAGCTTGACACCATCTTCAAAGCTTAGATCCGCATGCCACTCATCACGAAGA
ATTGGCCTAGCGAGATGGTTTCCAAATCCGGTGGCAACATGATTGTCCTCGAAACTAACACCAATCATTGACACCATGCCAAGGTA
AGTTTCGCCATTCTTGACACCTCCAAGGACGAGAGTGTTCCAGAGAGGGTTAAACTTGTTGCGACGGTTGTACATCACTCGGGTCA
GATAGTTGTGCACCTCTTTTGGTCCCAAAGAGTTACCATCGTCCCACATGCTATCATTCAACACGAGCTCATCAAGATAACGGAGA
ATCTCCTGAAAGTCACTGATTTCTCCACTGGCACCGAGAAGAGAATGCTTACCAATAGCCTTCATTCTCTCAATGTTCTTGTACCT
TAAGGTGGATCCATATGAACCTCCCATGTCGGAAGCCATTAAAACCCCATCTTTGTACTTGATTGCGACGATCGAAGTCCCAGTAA
CATATGGGTACAGTGTTCTTTGTGAATCAGCTTCTGCGTTCTTCACGGAATCTCCGTTCTCGATCGGAATGGTAAAAGTCATCTTT
TTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGAGAGAGGTTAGGTTCTTTTCTTCTAAGATCTGAAAGCTTTTTTATTTTGGT
CTAAACCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002891960 hypothetical protein ARALYDRAFT_474808 [Arabidopsis lyrata subsp. lyrata]12092e-130
NP_176040 proteasome subunit beta type-4 [Arabidopsis thaliana]11992e-129
AAC32074 20S proteasome beta subunit PBG1 [Arabidopsis thaliana]11983e-129
XP_002889738 20S proteasome beta subunit PBG1 [Arabidopsis lyrata subsp. lyrata]11894e-128
XP_002284990 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]10991e-117

Swiss-Prot top hits (Blast detail)Scoree value
Q7DLR9 Proteasome subunit beta type-411991e-130
P28024 Proteasome subunit beta type-4 (Fragment)5511e-055
Q3T108 Proteasome subunit beta type-45412e-054
P28070 Proteasome subunit beta type-45341e-053
P99026 Proteasome subunit beta type-45341e-053

TrEMBL top hits (Blast detail)Scoree value
C6T3I7 Proteasome subunit beta type10558e-113
C6SWQ4 Proteasome subunit beta type10477e-112
B9IKM7 Proteasome subunit beta type10405e-111
B7FJ04 Proteasome subunit beta type10324e-110
B9H9B4 Proteasome subunit beta type10172e-108

Arabidopsis top hits (Blast detail)Scoree value
AT1G56450.1 PBG1; peptidase/ threonine-type endopeptidase12007e-132

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  8%
 
71  8%
 
96  50%
 
82  17%
 
101  8%
 
61  8%

Unigene MembersMember information