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Information for unigene UN19922

FASTA Sequence
Unigene ID: UN19922Length: 1683  SNP
GGAAACTTTAAATGGAATAAATAAAAGACAACATATCTATAAAAAAAAGTATAAGCATAACAAACATGATTACTTTTGAATCGAGA
TGGAACAAAGATACATACAATAAGACATAAACACAATCTTATGTTTCACCACTCAAACTACGTAATCAAAAGTATAAAACAACTTT
GAACTCATCTTCACGAGTCCATAGAACCACACCATCCATCGAGTGTGTCGATGTCATATATATTTAAATTATGAACCGCTGCCTCA
TTCGCTTGATACATTTCCAAATTGCCAAGGATTAAACTCGATAGATTTGAGGTCCACTTCACTGCTCGAGCTCGGTGCTGTATCTC
GGTGTTCATTGTACTTCCCGTTGTATTGGTATATCTCAATATCTCCCCATGGCGTAGATGTGATCTCATCCGTTAGATCGAACCAT
CTCGGTGTGAACTTCTGTCCCTTTGTCTCTCGTGTCCTCTTTTCTGCCCTTTGTCTCTCCTCAAGGCTGTGCTTCTCGGAACCAGC
TTTAGAAAGGTCACCCTGCTCAAGGGCATATCTATCGGGACGGAGACGTGAGTCTGAAGCCAAGAGCTTAGAAGGAGCTGTGTCGA
AGCTGTTTATCTTGTGAGCAAAGTGAGTGTACTGAAACTTGTCATTCTTGGGAACATCAGCCACATGCCACACCTCTTTAAGCTCA
GTGCCAGGAAGGGGTTCACCCTCGGTATCACAAGGCTGGTAGCTTATTTTCTCATTCCATTTTCCTGTCATCATGATCTTAGGTTC
TTCGTCTGCGCTGTAAACGTATCCATCCACTTCATAGCGACCAGAACCGAACCAACCACATGGCTGGAAATAAAGAACAACTTTGT
CTCCGGTGGTTAAATTAGTCATGACCATTTCTCCGGGTGAGTCAACCCAAGTTCGTCCAAATATTAGATTGTGGACCTTAGTGAGA
GGCGGCACCAAATCCAGAACCACGCCATCTTTTTTGAGGGTTACACGCGTTCTGCCAACAGGGTAAACATCAACAGAGTTACCCAA
AAGCTTAGTTTTCAACTTTGAGGTGACGTCGTAAGTGAAGTGCTCGTTCTCGGCGTGACCAGCACTCATTGGGGGATGATGGCTAA
CCTGCTCGGAAAGAAAGGAAATACCACCATGGTTGGCCATCTCATACGTCTCACCAAGAATAGGATTGAAAGGCTTCCAAGTTCGT
TGGTAGGCAAAGTAAACAGATATAGCCCATGATGAAGCATATACTAAACGCAAGTACGGATCCTCGCATTCATCGGCTTGATCCAG
CAAATAGGAATACTCCATTAACTCAGCCATCTTCTGGAGCATAGTCATGGGCTCGAAAATAATAACAGGAAGTGTGACCATTGAGG
TAATATCCGAACCTATATACTTCTGCATCATCTTCCAGTAACTATCACGTTCCTCGTCTTTCCACCTTCCTCTCTGAGCTTCCTCT
TCTGCATCTTCTTTACCACCTTCTGGATTTATGACCTCAACTCCTTCATAAGCAATCAACCCGTTGACGGATCTAGACATGGCGTT
GCCGAACATGGAGAAACCGGAGGTCATGGCGGCGAAGAAGCCCTTGTTCTCGTTCTTCTTTGGACTCCCCATTTTTTTTTCTTTCT
TTCTCAAATCCGATCCCTGACCCGTTTTGATTTCCAGAGAATTCTATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864633 oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata]23026e-257
NP_200750 oxysterol binding protein-related protein 3C [Arabidopsis thaliana]23018e-257
XP_002283434 PREDICTED: similar to oxysterol-binding family protein [Vitis vinifera]21583e-240
ACU21233 unknown [Glycine max]20543e-228
XP_002882612 oxysterol-binding family protein [Arabidopsis lyrata subsp. lyrata]20293e-225

Swiss-Prot top hits (Blast detail)Scoree value
Q54QP6 Oxysterol-binding protein 86113e-062
O14340 Oxysterol-binding protein homolog C2F12.05c5631e-056
Q54ID7 Oxysterol-binding protein 115451e-054
Q8BXR9 Oxysterol-binding protein-related protein 65145e-051
Q9BZF3 Oxysterol-binding protein-related protein 65137e-051

TrEMBL top hits (Blast detail)Scoree value
Q93Y40 Oxysterol-binding protein23015e-257
Q9LTI7 Oxysterol-binding protein22282e-248
C6THD1 Putative uncharacterized protein20542e-228
Q9SR33 Putative oxysterol-binding protein20273e-225
Q9LZM1 Putative oxysterol-binding protein20131e-223

Arabidopsis top hits (Blast detail)Scoree value
AT5G59420.1 ORP3C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C); oxysterol binding23022e-259
AT3G09300.1 ORP3B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3B); oxysterol binding20272e-227
AT5G02100.1 UNE18 (UNFERTILIZED EMBRYO SAC 18); oxysterol binding / sterol binding20137e-226
AT4G12460.2 ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B); oxysterol binding4464e-044
AT4G12460.1 ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B); oxysterol binding4357e-043

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  15%
 
83  23%
 
181  8%
 
202  15%
 
191  8%
 
112  15%
 
212  15%

Unigene MembersMember information