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Information for unigene UN19933
| FASTA Sequence |
| Unigene ID: UN19933 | Length: 980 |
| SNP | GGATCAAAAGGCATCCTCAAACATAGAACTCAAACCACAGATATCACTGGCGTGTGCTCTCCTCACTTGCCTTGAAACTAGAGCTT
CAATCCCAAAAAAAAGATGGCTGCTTCAGCTGCTGTAACCGCAAACTACGTCCTCAAGCCACCTCCATACCCTCTGGATGCTTTGG
AGCCGCATATGAGCAAGCAAACTCTAGAGTTTCACTGGGGAAAACACCACAGGGCTTACGTGGACAACCTCAAGAAACAGGTTCTT
GGATCCGAGCTTGAAGGCAAGCCCTTAGAGCATATCATCCAAAACACTTACAACAATGGCGACCTCCTCCCTCCTTTCAACAACGC
TGCTCAGGCGTGGAACCACGAGTTTTTCTGGGAATCAATGAAACCAGGTGGTGGAGGAAAGCCATCAGGAGAGCTTCTTGCTCTGC
TTGAAAGAGATTTCACTTCTTATGAGAAGTTTTATGATGAGTTCAATGCTGCTGCTGCCACTCAGTTTGGAGCTGGCTGGGCCTGG
CTTGCTTACGCAGATAACAAACTCAAAGTTGTGAAAACTCCAAATGCTGTAAACCCCCTTGTGCTCGGCTCTTTCCCATTGCTTAC
CATTGATGTCTGGGAGCATGCATACTATCTCGACTTCCAGAACCGGAGACCCGATTACATAAAGACATTCATGAACAATCTTGTGT
CTTGGGAGGCTGTTAGTTCCAGACTTGAGGCTGCCAAGGCTGCTTCTGCTTAAGCAGAGTCATCAGACACACTCGGACCAAAACTC
TGACTTCAGTTATGTGTGTTATGCATTACTGAAGTTTCTTAATAAAATATTGGTCGTGGTTATAAGGACACTGCTCTCTTGTTGTA
AGGTCTCATCGAGTCTTTCATCTTATTTCTTGTTTACTGAGATTTGAATCATCGTGTAATAATGAACTACCATGTTTTCTTCTTTG
TGTGATTTGTTTTTTATCTATTTATCTTGTGTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAC15842 superoxide dismutase [Raphanus sativus] | 1134 | 8e-122 |
| ABV89632 superoxide dismutase [Brassica rapa] | 1126 | 6e-121 |
| AEG89520 Fe superoxide dismutase [Brassica oleracea var. botrytis] | 1123 | 1e-120 |
| AAA32791 Fe-superoxide dismutase [Arabidopsis thaliana] | 1082 | 8e-116 |
| CAB36752 superoxide dismutase (EC 1.15.1.1) (Fe)(fragment) [Arabidopsis thaliana] | 1082 | 8e-116 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P21276 Superoxide dismutase [Fe], chloroplastic | 1079 | 8e-117 |
| P22302 Superoxide dismutase [Fe], chloroplastic (Fragment) | 820 | 9e-087 |
| P50061 Superoxide dismutase [Fe] | 594 | 1e-060 |
| P28759 Superoxide dismutase [Fe], chloroplastic | 588 | 7e-060 |
| P77968 Superoxide dismutase [Fe] | 581 | 4e-059 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O65327 Superoxide dismutase | 1134 | 5e-122 |
| A8IXL7 Superoxide dismutase | 1126 | 4e-121 |
| Q2V3F3 Superoxide dismutase | 957 | 2e-101 |
| B8YNX9 Superoxide dismutase | 793 | 2e-082 |
| Q6QJL0 Superoxide dismutase | 792 | 2e-082 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G25100.1 FSD1 (FE SUPEROXIDE DISMUTASE 1); copper ion binding / superoxide dismutase | 1080 | 5e-118 |
| AT4G25100.3 FSD1 (FE SUPEROXIDE DISMUTASE 1); copper ion binding / superoxide dismutase | 1080 | 5e-118 |
| AT4G25100.2 FSD1 (FE SUPEROXIDE DISMUTASE 1); copper ion binding / superoxide dismutase | 1080 | 5e-118 |
| AT4G25100.4 FSD1 (FE SUPEROXIDE DISMUTASE 1); copper ion binding / superoxide dismutase | 958 | 8e-104 |
| AT5G23310.1 FSD3 (FE SUPEROXIDE DISMUTASE 3); superoxide dismutase | 642 | 3e-067 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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