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Information for unigene UN20100

FASTA Sequence
Unigene ID: UN20100Length: 1267  SNP
GCTGGAATAAAACATAATCAAATTAACTAAAAAGCCCTCACCTGAGGGATAAATCAAGAACAATTTTGGTCCAAGCTGTGACTACT
AAAGAGTTACAACTTGGCACACAATCCAGACTCAACTCCAACTGCAAACGCACATAATAAAACTCTACTCAGAATCCCTCAGATTG
TTTTAAAGACCATTTATTGGTGAAATAGCTTTTCTTATAATTGGGTCCTTCTCCTACATCTTCTCTAATCACTCTTACCCTCCTGA
GATCCAATCTCCTGTAAGTAATGCTCTGCATCCAAGGCCGCCATACACCCAGTTCCTGCAGCTGTGATAGCCTGCCTATACTTCTT
GTCTTGCACATCTCCAGCAGCGAACACACCAACCACGCTCGTCTTAGTGGTACCAGGCTTGGTCACCACATACCCATCCTCATCAA
GCTCAAGCTGCCCATCCAAGAACTTCGTCGCCGGCTCATGACCAATCGCAAAGAACAACCCAGACACTTTCAAATCCGACACATCA
CCAGTAACAACGTTCTTCACCTTCAGACCACCAAGCACCCCTTTCCCGCTCTCATCTCCGTACGCCTCCACCACCGAAGAGTTCCA
AACCACTTCAATCTTAGGGTTCGACAACGCCCTCTGCTGCATGATCTTCGACGCCCTGAACGTATCCCTCCTGTGGATTATATAAA
CCTTAGATCCGTACTTGGTCAAGAAATTCGCCTCCTCCATCGCCGAGTCCCCTCCGCCGATAACCGCCAGAGGCTTGCTCCTGAAG
ATCGGAGCCGCGCCGTCGCAGACGGCGCAGGCCGAGATCCCTCGGTTCCAGAAACCGCCGGCGCCTTCGCCGGATCCGGCGAAGCT
CAGGCGTTTCGCGACGGCTCCGGTGGAGATGATCACCGCGTCGGCGAGGACGGTTCTGGAGTCGGTGAAGAGCTTGAAGGGCTTGG
AGGAGAGGTCGACCTTGGTGACGGTCTCGGTGAAGATCTGGGTGCCGAAGCGCTCCGACTGCTTGCGGAACTTGTCGACGATGTCG
ATGCCGAGGATGCCTTCCGGGAAGCCGGGGAAGTTCTCGACGTCGGTGGTGGTGGTTAGCTGACCGCCGGGAGCGATGTCGTTTGC
CATCCATCCTTCGAAGAGGAGGGGCTTGAGCTCGGCTCTGGCCGCGTAGATCGCCGCCGTGTGCGCTGCGGGGCCGCTTCCGACGA
TGCAGACCTTGGTTTTGTGAGTTTCCATGGCGGCGGTGAGGACGAAGAGGATAGATACGGCGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884056 thioredoxin reductase [Arabidopsis lyrata subsp. lyrata]16294e-179
NP_179334 NADPH-dependent thioredoxin reductase A [Arabidopsis thaliana]16214e-178
Q39242 RecName: Full=Thioredoxin reductase 2; AltName: Full=NADPH-dependent thioredoxin reductase 2; Short=NTR2; AltName: Full=NADPH-dependent thioredoxin reductase A; Short=AtNTRA16214e-178
BAE98622 putative thioredoxin reductase [Arabidopsis thaliana]16214e-178
XP_002869086 NADPH-dependent thioredoxin reductase 1 [Arabidopsis lyrata subsp. lyrata]15524e-170

Swiss-Prot top hits (Blast detail)Scoree value
Q39242 Thioredoxin reductase 216273e-180
Q39243 Thioredoxin reductase 115566e-172
Q6ZFU6 Thioredoxin reductase NTRB13442e-147
Q69PS6 Thioredoxin reductase NTRA13272e-145
Q6FR39 Thioredoxin reductase10404e-112

TrEMBL top hits (Blast detail)Scoree value
A6XJ26 Thioredoxin reductase14124e-154
A9NU83 Thioredoxin reductase13542e-147
A9NXV4 Thioredoxin reductase13507e-147
C5PIA5 Thioredoxin reductase10201e-108
C6KI90 Thioredoxin reductase10201e-108

Arabidopsis top hits (Blast detail)Scoree value
AT2G17420.1 NTRA (NADPH-DEPENDENT THIOREDOXIN REDUCTASE A); thioredoxin-disulfide reductase16282e-181
AT4G35460.1 NTRB (NADPH-DEPENDENT THIOREDOXIN REDUCTASE B); thioredoxin-disulfide reductase15574e-173
AT2G41680.1 NTRC (NADPH-DEPENDENT THIOREDOXIN REDUCTASE C); thioredoxin-disulfide reductase8621e-092
AT3G09000.1 proline-rich family protein1667e-012
AT1G44191.1 Encodes a ECA1 gametogenesis related family protein1651e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  20%
 
123  30%
 
81  10%
 
192  20%
 
181  10%
 
211  10%

Unigene MembersMember information