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Information for unigene UN20181

FASTA Sequence
Unigene ID: UN20181Length: 928  SNP
GGATAAACAAAGCCCCCCTCGTTTGCTTCTTGGATTCATCTAGTTGTTATCTCCACAGAAAAAAAATGAGCAACCTTATTAGTTCT
CTCGAACTCTCATCTCTTACACTCGAAGACCCATGGCCTGCTTTCTAGCCTAATTTTCTTCGAGAATCTTTTTTTTTTTAATTCTG
AACCCTTCTTGGTTTCTTCATCATCTTTCTAAAACGTTTTCTAAAAATCATGGGGACTGGAGAAAAAACTCTGAAAAGCTTCCATT
TACATCGCAAACAAACGGCCAAAATCAAAGATGTTCCAAAAGGATGCTTAGCGATCAAAGTTGGATCACAAGGAGAAGAGCAACAA
AGATTTATAGTTCCTATTTTGTATTTTAATCATCCGTTGTTCATGCAGCTCTTGAAAGAAGCAGAAGATGAGTATGGATTCGATCA
AAAGGGCACCATCACGATCCCTTGCCACGTGGCTGAGTTTCGTTACGTTCAAGCTTTGATTGATGGAGAGAGAATTGTTTATCATG
GTAACAATAACCATCTTCATAGACATAGCGGTCGTGACCAGTATCATCCTCTTGTTGGATGTTTCAGAACGTGATGAATGATGAGG
ACGAGGAGGATGAATGAATGCTTGTATGCGCTAAGTTTTCAATCCATGAGGAGTTGAGGAGCCAAAACTGGCCTAACCCAAGAATA
AAATGATTTTTCTGTTTTCTCTTTGATGATTTTAGTATTTTCTGTAATTTGTATGGAATTTCAAGTTAAAAGAAAGTTATTTTCTG
ATTTTATGGTTTATCGTTTTGAATGACTGGAGATAATCAACAAATGACGATGATCACAAGAAAGCGAAGCTTTTTTTTTTGTAGAT
TGCATCTAAAATTTAGTCACGACATGTATAAATTTGATAGTAATGAAAAAAGAAATATTGTGAGATGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_182192 SAUR-like auxin-responsive protein [Arabidopsis thaliana]5881e-058
XP_002880259 auxin-responsive family protein [Arabidopsis lyrata subsp. lyrata]5881e-058
XP_002263012 PREDICTED: hypothetical protein [Vitis vinifera]3972e-036
XP_002301429 SAUR family protein [Populus trichocarpa]3802e-034
XP_002320219 SAUR family protein [Populus trichocarpa]3765e-034

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9ZUZ3 At2g466905881e-058
B9GR63 SAUR family protein3801e-034
B9I925 SAUR family protein3764e-034
Q9M275 Putative uncharacterized protein F21F14.703631e-032
A5C137 Putative uncharacterized protein3622e-032

Arabidopsis top hits (Blast detail)Scoree value
AT2G46690.1 auxin-responsive family protein5886e-061
AT3G61900.1 auxin-responsive family protein3637e-035
AT4G00880.1 auxin-responsive family protein3475e-033
AT5G53590.1 auxin-responsive family protein2472e-021
AT4G22620.1 auxin-responsive family protein2032e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  10%
 
94  13%
 
1113  43%
 
63  10%
 
73  10%
 
124  13%

Unigene MembersMember information