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Information for unigene UN20250
| FASTA Sequence |
| Unigene ID: UN20250 | Length: 987 |
SSR | SNP | GGATACACCGCACTCTGTCTTCTTCTTCCCTCTCTCTCTCTCTCATTTATCTCTCCATTTTGTTTGGAACTATGGATAAGGTTAAA
CTCGTAAAGAATGGTGTTATGAGATTGCCACCTGGATTCAGATTTCATCCCACTGATGAAGAGCTTGTGGTTCAGTATCTCAAGAG
AAAAGTCTTGTGTTCTCCATTACCAGCTTCCATCATTCCTGACTTTGATGTTTGCAGAGCTGATCCTTGGGACTTGCCTGGCAATT
TGGAGAAGGAGAGGTACTTCTTCAGCACAAGGGAAGCTAAGTACCCAAATGGGAACCGGTCTAATAGAGCAACGGGTTCGGGTTAT
TGGAAAGCTACCGGTATTGATAAACGGGTAGTGACCTCTAGAGGAAATCAAATCGTTGGTTTGAAGAAAACACTCGTTTTCTACAA
AGGCAAACCACCTCATGGCTCAAGAACCGATTGGATCATGCACGAATATCGTCTATCTTCTTCCCCACCGAGTTCAATGGGTCCTA
CTCAGAACTGGGTTCTTTGTCGTATCTTCCTTAAAAAGAGAGCTGGTAACAAGAGCGACGACGACGACGGAGATAACCGGAGTATT
AGATATGATAATGACCAAATTGAAATAATTACAACGAACCAAACCGAAGATAAAACTAAACCAATCTTCTTCGACTTCATGAGAAA
AGAAAGGACCACAGACTTGAACCTTTTACCTAGCTCTCCTTCTTCCGACCACGCTTCAAGTGGACTCACGACGGAGCTCTTCTCTT
CTGATGAAGAGACCAGTAGTTGCAATAGTTTCAGAAGAAATCTTTAATTTAATATTAATGTTGACTATCTTTAATAACTGTTATAA
TAATTTTATATTAATACGATTCTGCTTCTTTTTTCATTTTACTTGAAAACGAGTCACTGTTCTTTGTTTCATATATTTTCCTAAAA
CATATATTTTGTGAACTATTGAATTGCATGAAAAATGTAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33903 unnamed protein product [Thellungiella halophila] | 1271 | 1e-137 |
| XP_002871551 ANAC083 [Arabidopsis lyrata subsp. lyrata] | 1239 | 5e-134 |
| NP_196822 NAC domain containing protein 83 [Arabidopsis thaliana] | 1226 | 2e-132 |
| XP_002297860 NAC domain protein, IPR003441 [Populus trichocarpa] | 849 | 8e-089 |
| XP_002304662 NAC domain protein, IPR003441 [Populus trichocarpa] | 842 | 6e-088 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O49255 NAC domain-containing protein 29 | 472 | 2e-046 |
| Q52QH4 NAC domain-containing protein 68 | 461 | 4e-045 |
| Q9ZNU2 NAC domain-containing protein 18 | 439 | 1e-042 |
| Q93VY3 NAC domain-containing protein 72 | 437 | 2e-042 |
| Q9C932 NAC domain-containing protein 19 | 435 | 4e-042 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FY93 AT5g13180/T19L5_140 | 1226 | 1e-132 |
| B9GMQ3 NAC domain protein, IPR003441 | 849 | 6e-089 |
| B9GZC3 NAC domain protein, IPR003441 | 842 | 4e-088 |
| B9RFW3 NAC domain-containing protein, putative | 815 | 5e-085 |
| B2ZGQ7 NAC domain protein | 733 | 2e-075 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13180.1 ANAC083 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 83); transcription factor | 1226 | 7e-135 |
| AT2G33480.2 ANAC041 (Arabidopsis NAC domain containing protein 41); transcription factor | 694 | 3e-073 |
| AT2G33480.1 ANAC041 (Arabidopsis NAC domain containing protein 41); transcription factor | 680 | 1e-071 |
| AT3G04070.2 anac047 (Arabidopsis NAC domain containing protein 47); transcription factor | 481 | 2e-048 |
| AT1G69490.1 NAP (NAC-like, activated by AP3/PI); transcription factor | 472 | 2e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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