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Information for unigene UN20274

FASTA Sequence
Unigene ID: UN20274Length: 868  SNP
GGAGATCTAACAAGAAGAAAACAGTAAGCACTTCCAAAGAAAATCAATTATGGCAACAATGAAGCAATCTCTTGTTCTTTCCATAT
TAATACTACTATCATCATCATTTGCACCAATCCATGCCCGCAACAAACCACATCCGGCAAACTCTCCCCCACCGGTAGCAACTCCA
GCGCCGGGACCATCAAATTCTGATTGCTCGAGCGTTATATTTGGCATGATGGATTGTCTCTCGTACCTTACCCCTGGATCAAATGA
TACTAAGCCCACGAAAGCGTGTTGCGGGGGAATCCAATCTGTTGTACAATATAATCCTGATTGTGTTTGCATCGGCTTAGCGAGTA
GCAAAGATATGGGTATTGCAGTGAATAACACAAGAGCTCTTGCCATGCCTACGATTTGCAAGCTCCCCGTTCTTCCTCCCCATTGT
ACTATACTGGACGCGCCGAGTGCATCTACTCCTGGTATGTCTTCAGTTTCTCCTTCTGCTGTAACACCTATGACTCCACCGTCTTC
AGCCCAGTCACCCACATCTTCTCCAACTTTGGCTGACTCGCCGGGCATGACTGCACCACCTCCCTCGAGTTCTGGCACCAACCACC
TCTCAGTTTCAACATTGACCTTCGTTTTCATATATTTCTTCTATAACTTACATTTTGGCTTTTTCTAATTAATTTCAGCTTTCACG
TTTCCATATATTTTTCTACTGAATTTTTTTTCTTCTACTGAATTGGACATTATATGTTCGTGATTTCAAGACCGATGCTGTTTTTA
ATTTGATGTTCTTTGTTAATCAAATTAATATATATTTTTTTTAAATCATGCAACATTGATATAGATCTGCTGGGGTTTTGTTGCTG
TTTCAGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_192607 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana]5924e-059
AAB81871 putative lipid transfer protein [Arabidopsis thaliana]5388e-053
XP_002874542 predicted protein [Arabidopsis lyrata subsp. lyrata]5111e-049
XP_002891209 predicted protein [Arabidopsis lyrata subsp. lyrata]3892e-035
NP_174848 bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana]3837e-035

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZQI8 Non-specific lipid-transfer protein-like protein At2g138202302e-018
Q8VYI9 Non-specific lipid-transfer protein-like protein At5g640801981e-014

TrEMBL top hits (Blast detail)Scoree value
Q2PE70 Non-specific lipid-transfer protein5923e-059
O22272 Non-specific lipid-transfer protein5386e-053
Q3ED09 Non-specific lipid-transfer protein3835e-035
B9RJG3 Non-specific lipid-transfer protein2653e-021
B9SWA9 Non-specific lipid-transfer protein2554e-020

Arabidopsis top hits (Blast detail)Scoree value
AT4G08670.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein5922e-061
AT1G36150.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein3833e-037
AT2G13820.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein2302e-019
AT5G64080.2 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein2005e-016
AT2G13820.2 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein1997e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
712  29%
 
99  21%
 
610  24%
 
84  10%
 
115  12%
 
122  5%

Unigene MembersMember information