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Information for unigene UN20321

FASTA Sequence
Unigene ID: UN20321Length: 1145  SNP
GGGAAAAAAAAGTGTGGCAATTAGAATTTTGGTGTGGCAAAGAGAATAATATTTTTGAAGGTGTGGCAATGGAGAATACTATCCCT
CTATCTCTCCCAAATCCCTAAAACAGGAAGCACATCGTAAAGCGGCGGCTTAGGGTTATTTGCCTCTTCACCATGGACGCGTACGA
CATCCTGAGATCCGAGAGGTTAGAGTTCGAGAGTGAGGCTGCTGAGAAAGCCTTTGCCGACAGGATCAGTGGCAAGCCCCGAGCTT
TGATTTCTGTGACGGGATACAACCCTAATCTGCCTGAGGATGATATCAAGAAGGAACTGATTGAACTCTTCAGTTCATGTGGCGAC
GTTACAAGGGTTATTGTTCCCAAAGACCCTGATCATAGCCCTAATCTCGACAGACGTGCTTTAGTTATTCTTTTCGGAGATGGGGC
AGAAGAGAAGGCCTTGCAACTTAATGGAACTGACGTTGGAGGATGGAATGCTCTTGTTAAGGTTGAATCGGATGAAGAAGATGAGG
AGGCAGCACGCTATAGATCCTCTCTGATTAACGAACTAATGAATGACCCAAAATTTTGGTATGGCGTTTCGGTTAGGGGATATGAC
ACTTCCCTCCCTGTAGACCAAGTCGAGAGGGCTTTGAAGGAACATTTCTCTGATTGTGGGGAGATAACTCATGTTTTTGTCGATAC
TCTCGACAAGCTGACTAATGTCTATTTTTCCCTACAAGAAGGAGAAGCTAGGGCGCTGGCTCTTGATGGAATTAGAATGGGAGAAT
TCGAATTAGATATTTCTGGCGTACCTTCAGTCCTAAGTAACCGTCCCAATCCCTTTGGCAACGGTGAAATTGAAATTGGTTTGGGC
TATACTGTCCCAGCTCATATGATTGAGTTTGCCAACAAGGACGACGACGAGATCGAGAACAAGGTCATTGCTTTCAAGAAGCAGAG
GAGGCTTATCTAGAAATTTCTCTTTCTCTCAAGAAGCTCTATCTTTGGTGTTTAATAATAATAAATCGTGTGAATGATAATACAAT
GCAACCTTGGGGCTTTCTTACTTACGTTTAATCTCAAAGCTCACATTATGTATGTACGATGAGCCATTTGTGCTTTCTTACTTTAT
GTTTAATCTCAAAGCTCAACTAATTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873095 predicted protein [Arabidopsis lyrata subsp. lyrata]2711e-021
XP_002873094 predicted protein [Arabidopsis lyrata subsp. lyrata]2656e-021
XP_002883446 predicted protein [Arabidopsis lyrata subsp. lyrata]2396e-018
XP_002871038 predicted protein [Arabidopsis lyrata subsp. lyrata]2306e-017
XP_002893783 predicted protein [Arabidopsis lyrata subsp. lyrata]1957e-013

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q67YA0 Putative uncharacterized protein At5g035002637e-021
Q9LZD6 Putative uncharacterized protein F12E4_280 (Fragment)2466e-019
Q9S755 MZB10.19 protein1751e-010
Q9LZD9 Putative uncharacterized protein F12E4_2501661e-009
Q9CAJ2 Putative uncharacterized protein At1g728001508e-008

Arabidopsis top hits (Blast detail)Scoree value
AT5G03495.1 nucleotide binding2634e-023
AT5G03480.1 nucleic acid binding / nucleotide binding2267e-019
AT3G09160.1 RNA recognition motif (RRM)-containing protein1756e-013
AT1G72800.1 nuM1-related1505e-010
AT5G53700.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: nucleic acid binding / nucleotide binding (TAIR:AT5G03480.1); Has 74 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).1452e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
126  23%
 
102  8%
 
117  27%
 
87  27%
 
92  8%
 
62  8%

Unigene MembersMember information