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Information for unigene UN20328

FASTA Sequence
Unigene ID: UN20328Length: 981  SNP
AGGGGATCCGATCCTTTCCAATCCACACGTCCAGTAACAAAAAACCCAAAAAAATGAACACTCCAATAAAACTCGCCTTTCTAATT
CTATGCATCGCCCTAACCGCAACTGGATTTATAATCCCAGCCAAACGTGACGCCGTCACACCGCAACACCTGAAAACCGTCGCAGG
GATCTGCGGCGTTGTCCAAGACAAACGTCTCTGTAGCATAACCCTGAACACTGTCCCAAGCAATGACCCTGACGTTTTGGTCCGTC
ACTTAGCGACGGCTGCAGAAACCTCGGTTAAAAAGGGCTTGAAGTTCCTCTCTGGAATCAAACCCAAGTACAAGGGAGACAAATTT
GCCACAACTTGCATCACCAGTTGCGAGAAACAGCTAAACAACGCCTTGGAAGACTTTTCAGATTTCTGGAAAGCCGCTGGAAAAGA
CATCAAGAGCATGGCCGATAATTACTTCACATGCAAGAAGAAGATGACATCGATCTTCAACTACCAATCGACTTGTCTCGATGACA
TCTATGACAAAACGTTGTTGAAAGAAGTTCAAGGAGGGATTGGGCTTGGGAAAAGAATGAGTGGCGAGTCTGTAGATGTGTTCGCT
GGAATGGGCAAAGTATTTAACACTCTTAACATTAAGACCAAACTTAACCAGAAAGATACCGATTCGTTGCTCCCACCACCTTTGTC
ATTTTACTACTACTGATCTATTTATTGAAGAAAAAGCATGGCATCGTCTATGGTGATGAATAATCTGCATCTTTTGGGTTTTTTTT
TCAGTTATGTTAGGAATCTTGTAAAGAAAGGTTCCTTCTAATGTATGTTTGTGATTAATACGTTATGGGTGATAATCATGTATGGA
CCTCGTGGTTGGAAAGGATATGGACAAATGTGATTATATAATATTAATAACATATTTGGTATAATGCCTTTTATGTATGCGCAATT
TTTATTTTTATTTTAGAATTTTCCTTTTGTTAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_182228 plant invertase/pectin methylesterase inhibitor domain-containing protein [Arabidopsis thaliana]9743e-103
ABK28540 unknown [Arabidopsis thaliana]9743e-103
XP_002882103 invertase/pectin methylesterase inhibitor family protein [Arabidopsis lyrata subsp. lyrata]9653e-102
AAM64864 putative pectinesterase [Arabidopsis thaliana]9601e-101
XP_002878441 invertase/pectin methylesterase inhibitor family protein [Arabidopsis lyrata subsp. lyrata]6015e-060

Swiss-Prot top hits (Blast detail)Scoree value
Q5MFV8 Pectinesterase 52241e-017
Q42608 Pectinesterase/pectinesterase inhibitor (Fragment)2203e-017
P41510 Probable pectinesterase/pectinesterase inhibitor2203e-017
O80722 Pectinesterase 41962e-014
Q5MFV6 Probable pectinesterase/pectinesterase inhibitor VGDH21926e-014

TrEMBL top hits (Blast detail)Scoree value
A0MET9 Putative uncharacterized protein (Fragment)9742e-103
O80720 Invertase/pectin methylesterase inhibitor family protein9742e-103
Q8LBB4 Putative pectinesterase9608e-102
Q9M1Q6 At3g621805987e-060
Q2PYP0 Pectinesterase2223e-016

Arabidopsis top hits (Blast detail)Scoree value
AT2G47050.1 invertase/pectin methylesterase inhibitor family protein9758e-106
AT3G62180.1 invertase/pectin methylesterase inhibitor family protein6057e-063
AT2G47040.1 VGD1 (VANGUARD1); enzyme inhibitor/ pectinesterase2241e-018
AT2G47030.1 VGDH1; enzyme inhibitor/ pectinesterase1962e-015
AT3G62170.1 VGDH2 (Vanguard 1 homolog 2); enzyme inhibitor/ pectinesterase1925e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
79  26%
 
65  15%
 
116  18%
 
82  6%
 
106  18%
 
123  9%
 
93  9%

Unigene MembersMember information