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Information for unigene UN20770
| FASTA Sequence |
| Unigene ID: UN20770 | Length: 1207 |
| SNP | GGATCGAATGCATCCACCTACGAACCACTCTTTCCTTCTTCTTCTTCGAGGTTTCTTCTTCAGCTCCGAAACCATATATTCCTTCA
TCGTCTTCTTCTTTTCCCTAACTTTCTTCTTCTGGATCTCCCAAACACCAATCCTGACAGACCAAGCTTCTCCGCAATCCTCTTCC
TCTCGTGGGGATGCGGAATCCTCCTCCAGTTCTCCGCCTGATGCTATGATATCTTCCAGAGATCCCGACGCTCTCTTTAGCGGCGG
TGGAATCAGCTTTTTAGCGGGGAATCATCGGCCTGTGAAGTTTAGTTATGGTTATTCTAGTCTCAAGGGTAAACGAGCAACAATGG
AGGACTTCTTCGAGACTAGAATATCTGATGTTGATGGACAAATGGTTGCCTTCTTCGGCGTCTTCGATGGTCACGGTGGTGCAAGA
ACTGCAGAGTATCTTAAAAACAATCTTTTCAACAACTTAGTTACTCATCATGACTTTATCTCAGACACCAAGAAAGCCATTGTGCA
AGTGTTTAAGCAGACGGATGAGGAGTATCTCGTTGAAGAGAGTGGACAGCCTAAGAACGCTGGCTCAACCGCATCAACTGCTTTGC
TTGTTGGAGATAAGTTAATTGTTGCTAACGTTGGTGATTCTAGAGTTGTAGCGTCTAGAAATGCCTCAGCTGTTCCGCTTTCTAAT
GATCACAAACCTGATAGATCAGATGAGCGACAGAGGATTGAAGATGCTGGTGGCTTCATCATCTGGGCTGGAACATGGCGAGTTGG
TGGAATTCTTGCTGTGTCCCGGGCATTTGGAGACAAGCAACTTAAGCCATATGTAATTGCGGAGCCAGAGATTCAGGAGGAGGATA
TAAGCACGTTGGACTTTATTGTTATCGCCAGCGATGGATTGTGGAATGTGTTGTCAAACGAGGATGCCGTGGCAATAGCACGAGAC
ATTTCAGATGCGGAAACAGCTTCACGAAAGCTAGTTCAAGAAGCATACGCACGGGGTAGCTGCGACAATATCACTTGCATTGTTGT
TCGATTTGAGGTTTCTTGAGATATAGCCAAAGGCGTACATTGTTCTTCTTTGAATGCATCGTCTTCAGCTTTGACCTTCTCCTTCC
ATGTATTAGATTGGTTAATATAAAACAAAAAAAAAACAATGAAACTTTATGATTTTTATTTGTAAAAGAAACTGAAATACAGTTAG
TTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_175057 putative protein phosphatase 2C 11 [Arabidopsis thaliana] | 1405 | 4e-153 |
| BAJ34168 unnamed protein product [Thellungiella halophila] | 1329 | 3e-144 |
| XP_002893965 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1313 | 2e-142 |
| XP_002520256 protein phosphatase 2c, putative [Ricinus communis] | 1182 | 3e-127 |
| ABK96108 unknown [Populus trichocarpa] | 1122 | 3e-120 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8VZN9 Probable protein phosphatase 2C 11 | 1405 | 2e-154 |
| Q8RXV3 Probable protein phosphatase 2C 59 | 899 | 8e-096 |
| Q8LAY8 Probable protein phosphatase 2C 69 | 887 | 2e-094 |
| Q67UX7 Probable protein phosphatase 2C 10 | 880 | 1e-093 |
| Q4PSE8 Probable protein phosphatase 2C 71 | 880 | 1e-093 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S2N7 Protein phosphatase 2c, putative | 1182 | 2e-127 |
| A9PIA5 Putative uncharacterized protein | 1122 | 2e-120 |
| B9H7M2 Predicted protein | 1118 | 5e-120 |
| B9GTP6 Predicted protein | 982 | 3e-104 |
| B9RNR4 Protein phosphatase 2c, putative | 917 | 1e-096 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G43900.1 protein phosphatase 2C, putative / PP2C, putative | 1406 | 1e-155 |
| AT4G31750.1 WIN2 (HOPW1-1-INTERACTING 2); protein serine/threonine phosphatase | 899 | 7e-097 |
| AT5G10740.1 protein phosphatase 2C-related / PP2C-related | 887 | 2e-095 |
| AT5G24940.1 protein phosphatase 2C, putative / PP2C, putative | 880 | 1e-094 |
| AT5G53140.1 protein phosphatase 2C, putative / PP2C, putative | 773 | 3e-082 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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