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Information for unigene UN20900
| FASTA Sequence |
| Unigene ID: UN20900 | Length: 871 |
SSR | SNP | AGGAATTCCAATGTAAATGATATACGTGTGCTTTTGTTTGAAAGAAAAGACATACACACATGTTCTTGGGTTAAAACTTTCTCCTG
CTTTACAGAAGTCAAAGCTTAAAAAAGAAGAAGAAGAAGCAAAAATGGAGAATCTACCTCCTGGTTACCGTCCCAATGTTGGTGTG
TGTCTAATCAATTCGGATAATCTGGTATTTGTAGCTTCAAGATTGAATGTTCCTGGAGCATGGCAGATGCCACAGGGAGGCATTGA
AGATGGAGAGGATCCAAAGTCAGCAGCCATGAGAGAGTTACAAGAAGAAACTGGGGTCGTTTCAGCTGCAATCATCGCTGAGGTTC
CAAATTGGTTGACATATGATTTCCCACCTGCAGTAAAGGCAAAGGTTAACCGTCTCTGGGGTGGTGAATGGCATGGTCAAGCGCAG
AAATGGTTCCTAGTGCGACTGATAAAGGATGAGGACGAAAGAGAGATCAATCTAGCAAACAACGAAGCGGATTCAGAGTTTGCAGA
GTGGAAATGGGCGAGACCTGAAGAAGTGGTAGATCAAGCAGTTGATTACAAAAGGCCAACCTACGAACAAGTCATCAAGACTTTTG
GTTCTTACTTGAATGATCCAGGAAGAGCTGCTAAATGTAAATCAGCCAAGTGGTAATAAGAAAACCTAAAATAATTGTTTGTCTTT
TTATAAAGTTTATAATTATATTTTGGGTTCTTTTTAGTGGAACCCTTTTGGAATGCAAAAGGTTTGTTTAGGTGTTTTTTTGTGTT
CATTTTTGTAAATTGGTTACTGGTACTAGAAGGTTTTGGTTTACTTGGGGGTTATTGTAATAAAAGTCTTTGTTTGGATTCGAAAA
GGAATGACTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_174303 nudix hydrolase 25 [Arabidopsis thaliana] | 899 | 1e-094 |
| XP_002890851 hypothetical protein ARALYDRAFT_473229 [Arabidopsis lyrata subsp. lyrata] | 894 | 4e-094 |
| XP_002314805 predicted protein [Populus trichocarpa] | 781 | 5e-081 |
| XP_002312442 predicted protein [Populus trichocarpa] | 776 | 2e-080 |
| XP_002526025 (Di)nucleoside polyphosphate hydrolase, putative [Ricinus communis] | 769 | 1e-079 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C6Z2 Nudix hydrolase 25 | 899 | 5e-096 |
| Q9CAF2 Nudix hydrolase 26, chloroplastic | 512 | 4e-051 |
| Q9FNH4 Nudix hydrolase 27, chloroplastic | 471 | 2e-046 |
| Q2RV14 RNA pyrophosphohydrolase | 352 | 1e-032 |
| B3CM46 RNA pyrophosphohydrolase | 305 | 4e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HW62 Predicted protein | 797 | 5e-083 |
| B9SJ56 (Di)nucleoside polyphosphate hydrolase, putative | 785 | 1e-081 |
| B9HJB6 Predicted protein | 776 | 1e-080 |
| A5BKT0 Putative uncharacterized protein | 747 | 3e-077 |
| C6SXU5 Putative uncharacterized protein | 743 | 9e-077 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G30110.1 ATNUDX25 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 25); bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) | 900 | 3e-097 |
| AT3G10620.1 ATNUDX26 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 26); bis(5'-adenosyl)-pentaphosphatase/ bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) | 512 | 3e-052 |
| AT5G06340.1 ATNUDX27 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 27); bis(5'-adenosyl)-pentaphosphatase/ bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) | 471 | 2e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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