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Information for unigene UN21043

FASTA Sequence
Unigene ID: UN21043Length: 1605  SNP
GTTTAAACTATAGTACTTTTAACAATCAAAGTGCCTTGTCACATTCTTATTGCCAGATAATATATACATCAGCTTAATCCATACAA
GTCACATTATTGGCTTTTCTATGCACATACCAAGCCCACAAAACACAATTAAGTGCAAAAAAAAACTCCTGGCGTTCAGAAGAAAA
AAGTTCAACAAAAACGTTCAATTTAAAAGGTAAAGTGAGATATAGCCGGCAGATAGCTAGGATATTCAGTAATTCACACCTAATGG
TGAATTTGCAGCAGATAGAGCAAGTGAAGCTCTCTTAACGAATCTCCCTTTCATTCGAGGTCGTTTCTCTGCATTCAGTTTACGTA
CCTCGTACCTTATCTTCTTCGAGAACAATCTCGTCCTCCTCTTCTCTCTGTACCTGGAAACCCTAGCCTCTCTTCCTCCATCCCCA
AACCCAGTTGATGGTAAACATCCACCAACGTAATGCTTATGATGACTTTCTCCTCCATTTATTTCCATGGAAACAACTGGCTTGTC
ACTGATGTCTATGTCTCGTTCTGGTGGCTCTCCCGATGTCCACGGTGGACCTTGGCCTCCCCAAGTGGATATCACCGAGTCATAGT
TTAAGCTCAGCATTAGAACATTCTTTTGCTCTTCCTCCTTCACTTTAATACATTCAACATTCTTTATTGCCTCTTCTTCGTATGTG
TTGTGTGACTCGTGATCAAACCTCAGCTCAAACGCCACAGTTCCATCCCCATCGTCCCGATCCTCACCGCAGCCTATTCCCATCTT
CATAGCTTTTGTTTCTTCTCCTTCATCTTCTTCTATCTCGTCTTTTTCGATTTTGAACATCTCTGTATTAGACAACCCTAGCCCCT
CCATCGCATAAGACTCTGTGACGTCTAATCCGTGGCCGAGTAGAGTCTCCACGTCAGCAGCAAACTCCTCAAGCTCCATGTCGGTC
GGGAAAAAACCATTCAGACAACTTTCAGCGTTGTCTTCGTCCTCCTGGTCATCTATTCTCATCAAAGGAAACTCGATCTTTGGCTC
AACGACATCGTTTAAAAACTGCTCAGCCACCATTGGATCAAGAACCGGCACTTGACAGATCAGCTGCTCTTCAATCTCATAGCTGT
CGGTCTGATCCTCTGCACTAATCTCCGGCACCAAATCATGAAATATCGACAAATTGTTTTTCTTACCAGACCCACGTGGAGTCCGA
GGTTTACGGGTGAACCCTTGATGCCACGTTGCAGCCTCGTGGGGAGGAGAAGAAGGTGAGTGGTTGTGGTTGGTATACTTCGAGAC
CGCCGGGCTGGCCGACTTCAAACGAACCCTCTCGTGCCGGCGAGCGAGAGGGTTCGCTGAGTGGACCAAAGTGTCGCAAGATTGGC
ATAGAAAAGCATCGTCGGCTGCGCAGTACCACCGTGCCCGCTTCTTCACGCAGCTGTCGCAGGCCCTCGCCGTCTTAGCTCCAACA
GCATTCGCCACACTTTTCATCTTTTTCACAAGCTCGAGAAACGAGAGAGCACGGGGGTCTTGTTCAACTTCAATAATTGAATATTT
TCTTCAAATTATTGCTCTCTGCAAAAAGTAAGATATGGTGTGCTCCTAGGGGTATAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890690 hypothetical protein ARALYDRAFT_472829 [Arabidopsis lyrata subsp. lyrata]17246e-190
BAJ34058 unnamed protein product [Thellungiella halophila]17121e-188
NP_173915 zinc finger protein CONSTANS-LIKE 16 [Arabidopsis thaliana]17102e-188
AAG50803 zinc finger protein, putative [Arabidopsis thaliana]17102e-188
AAM13173 unknown protein [Arabidopsis thaliana]16995e-187

Swiss-Prot top hits (Blast detail)Scoree value
Q8RWD0 Zinc finger protein CONSTANS-LIKE 1617101e-189
Q8LG76 Zinc finger protein CONSTANS-LIKE 611704e-127
Q9C9A9 Zinc finger protein CONSTANS-LIKE 72762e-023
Q9LU68 Protein CHLOROPLAST IMPORT APPARATUS 21992e-014
Q9M9B3 Zinc finger protein CONSTANS-LIKE 81874e-013

TrEMBL top hits (Blast detail)Scoree value
Q5XF38 At1g2544017102e-188
A5AT61 Putative uncharacterized protein7513e-077
B9DFQ4 AT1G68520 protein (Fragment)7495e-077
B9HJ27 Predicted protein (Fragment)4816e-046
B9T059 Putative uncharacterized protein4063e-037

Arabidopsis top hits (Blast detail)Scoree value
AT1G25440.1 zinc finger (B-box type) family protein17117e-191
AT1G68520.1 zinc finger (B-box type) family protein11704e-128
AT1G73870.1 zinc finger (B-box type) family protein2762e-024
AT5G14370.1 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CIL (TAIR:AT4G25990.1); Has 1815 Blast hits to 1506 proteins in 139 species: Archae - 0; Bacteria - 8; Metazoa - 291; Fungi - 53; Plants - 1145; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink).2261e-018
AT5G57180.2 CIA2 (CHLOROPLAST IMPORT APPARATUS 2); transcription regulator1991e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
97  44%
 
82  13%
 
211  6%
 
63  19%
 
102  13%
 
191  6%

Unigene MembersMember information