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Information for unigene UN21280
| FASTA Sequence |
| Unigene ID: UN21280 | Length: 1033 |
| SNP | GGACCACTAAAACGCAATCGCGCCTCACACAAGAAGAAGACCCGTGTTCCGTTTCGCTGTCTCCCTGTCTAAATTCTAATTCCATC
TCGTGTCCTCTCTTCCTCCTCTAGAAAAAAGTCTCCATGAACATACTCAACAGGTTCGGTTTAGGATCAGGCGGGCAAAGAAGCAT
GGATCCTTCTCCGATCGCCCAGGGAAACGACGATGACTCTCCGGCGCCGGGAAATCACTTTGCGCAATTCGCCGCGGGATGTTTCT
GGGGCGTGGAGCTGGCGTTTCAGAGGCTCCCAGGGGTGACTCATACAGAGGTTGGATACACACAAGGGATCACCCACAATCCTTCG
TACGAGGATGTCTGTTCTGAAACCACGGGACATGCCGAGGTCGTTAGGGTTCAGTATGATCCCAAAGACTGCACCTTTGAGTCTCT
CCTTGATTTGTTCTGGTCTAGGCATGATCCCACCACCTTGAATCGCCAGGGAAATGATGTGGGAACCCGATACCGATCAGGGCTAT
ACTACTACACACCCGAGCAGGAGAAACTAGCCCGCGAGTCACTTGAACGTCACCAGGAAAAAATGGAGAGGAAGATCATGACTGAG
ATCTTGCCTGCTAAGAAATTCTACAGAGCCGAGGAGCAACAGCAGCAGTATCTGTCCAAGGGTGGAAGGTTCGGCCTCGGGCAGTC
CTGTGCCAAAGGCTGCACCGACCCAATCCGCTGCTACGGCTAAAAGCCTGAGCTCCTCTGTTTCTCTCCCAAAACAGAGTGTGCTA
GTGACTTTTGTGTAAAAGCTATGTGACGTATGTTTATCGTTTGTACGATTATTTGTTGGTGGTGTTTCTCAAACTATTTGAATGAA
TAAGAGAATCTTGTGGACAAAAGAAATAGTCCAATGGATATAGCCAAATGGGCTAATGGTAGGACACTTGGTTTATTGTCCATTTC
TGCATGCTTGTGTACATCTTGTAAGACCATTTGTTCTGTTTTTAACTATTTAAAAAATAACTAAAAATAAAGCTAAAATATGTTTC
G
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAR13690 peptide methionine sulfoxide reductase [Brassica oleracea] | 1043 | 3e-111 |
| XP_002873310 peptide methionine sulfoxide reductase [Arabidopsis lyrata subsp. lyrata] | 961 | 9e-102 |
| AAM64607 peptide methionine sulfoxide reductase (msr) [Arabidopsis thaliana] | 959 | 2e-101 |
| AAR15472 peptide methionine sulfoxide reductase [Olimarabidopsis pumila] | 958 | 2e-101 |
| AAR15455 peptide methionine sulfoxide reductase [Capsella rubella] | 952 | 1e-100 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LY14 Peptide methionine sulfoxide reductase A3 | 950 | 8e-102 |
| Q9FKF7 Peptide methionine sulfoxide reductase A1 | 892 | 4e-095 |
| Q9SEC2 Peptide methionine sulfoxide reductase | 811 | 1e-085 |
| P54150 Peptide methionine sulfoxide reductase A4, chloroplastic | 796 | 6e-084 |
| Q9LY15 Peptide methionine sulfoxide reductase A2 | 788 | 5e-083 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6V5K7 Peptide methionine sulfoxide reductase | 1043 | 2e-111 |
| Q6V5E5 Peptide methionine sulfoxide reductase | 958 | 1e-101 |
| Q6V5G2 Peptide methionine sulfoxide reductase | 952 | 7e-101 |
| Q6V5D1 Peptide methionine sulfoxide reductase | 950 | 1e-100 |
| C6TEM0 Putative uncharacterized protein | 856 | 1e-089 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G07470.1 PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 951 | 5e-103 |
| AT5G61640.1 PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 893 | 3e-096 |
| AT4G25130.1 peptide methionine sulfoxide reductase, putative | 797 | 4e-085 |
| AT5G07460.1 PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 789 | 3e-084 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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