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Information for unigene UN21305

FASTA Sequence
Unigene ID: UN21305Length: 958  SNP
GTTACTAATTAAAAAATAATGTCATTTATATATATATTTCTGAACATAGAAAGATCCTCTGAAATATAATCGATTGTAGAAAAAAG
CTAACTTCCAGGAAGTATGAGATAAAAGTGAAATAATCTTTTCCATAATCCAGAAAAGCAAGTACTGATAAAAACTGACGAAGCAA
AAAAAAAAAAAGGTCTGATACACAAAAATCCAGAGATTCAAACGACGACAAGATAAAACCTAAACAAGAAGGTATCCCTCACTTCT
TCTCTTCTTTCTCAGCATCAGCAGCCCTCTTGGCTCTAGCACCTGCATGTCTCTTGTTTGTACGCTCTAGACGGATCTTGTCATAA
GCATTGAACGATTTCATCTCAGCGGTCAACTTCACTAGCTCAGTTGCTTGCTTCTCACGTACGATAGGCATGTAGTCTCCCTGGAC
TTGAGTGGCATTAGCCAACTCTTCGGCAGTAGAATCACCAGCCTTGACCTTCCTGGCACGACGTGGGAAGATGACCAACTTAGCCT
TGTAGGTTTTAAGCCTCTGGACATTGGACTGAAGACCCTCCAAAGATCTGTTCTTGCGACGATGGTCAACAGAGATACCAATGGTT
GGTGCCAACTTTTTTGGGATTCCAGCAGCCTTAAGCTCTTCAAGAGTGAATCCTTTACCAGTCCTGACCTTCATGTTGTACTTAAG
GGTCTGACCGTGCACAACAGGGCGGAGAGGTCCAGCGGTGGGACGGGGGAAGATCTTCACAGCCTTCTTTTGTCTCGCAGCTCTTC
TTCTGGTTTTCCTGGCAGGCTGGTTGAACCATGTCTTGACATAGTTCTGCCAGTGCTTCTTGAAATGACCATTCGGGATAACATTG
TTGTGCTTCATTTCTCCACCTCAGAATGTTACTGAAGAGAGCTTCCTTCCTCCTGCGGCGAGACGAGATAAAATGTCTAGGCTTCT
TTTGACGACTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABL97945 cold induced protein [Brassica rapa]10398e-111
P41129 RecName: Full=60S ribosomal protein L13-2; AltName: Full=Cold-induced protein C24B10381e-110
P41128 RecName: Full=60S ribosomal protein L13-1; AltName: Full=Cold-induced protein C24A10253e-109
XP_002877641 ATBBC1 [Arabidopsis lyrata subsp. lyrata]10031e-106
NP_190470 60S ribosomal protein L13-1 [Arabidopsis thaliana]10021e-106

Swiss-Prot top hits (Blast detail)Scoree value
P41129 60S ribosomal protein L13-210384e-112
P41128 60S ribosomal protein L13-110251e-110
P41127 60S ribosomal protein L13-110027e-108
Q9FF90 60S ribosomal protein L13-39642e-103
Q9SMT4 Putative 60S ribosomal protein L13-28881e-094

TrEMBL top hits (Blast detail)Scoree value
A1YMY6 60S ribosomal protein L1310395e-111
B9DGA4 60S ribosomal protein L1310021e-106
B9S1X7 60S ribosomal protein L139518e-101
B9STE6 60S ribosomal protein L139445e-100
B7FGS0 60S ribosomal protein L139402e-099

Arabidopsis top hits (Blast detail)Scoree value
AT3G49010.1 ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome10035e-109
AT3G49010.2 ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome10035e-109
AT3G49010.3 ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome10035e-109
AT3G49010.4 ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome9812e-106
AT5G23900.1 60S ribosomal protein L13 (RPL13D)9651e-104

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  13%
 
86  19%
 
73  10%
 
105  16%
 
201  3%
 
69  29%
 
211  3%
 
112  6%

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