Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21385

FASTA Sequence
Unigene ID: UN21385Length: 2037 SSRSNP
TTTTTGGATCACAGATCTGGACTTTTCTTGATATTTTTTTTTAATTTCTGTTTATTCAATGACCAATCTAGAAAACATAGACAAAA
GTTGAAACCCACTCTCTCTAAACTCTCTCTCAGCCTCATATGCAAACTGAGAATAATTTGAAGAGAGATGTCGATGATGAGCAAAA
ATCGAAGCAGCATCGGTGGCATGGGAACACCTTCATTTCTTGATTTGAAGAAGCAAGCTTCTTTTTTCTTCAAAGAAAAGCTCAAA
ACTGCGCGTTTAGCTCTCACCGACGTTACTCCTCTTCAACTATTGACTGAGGAAGCTACGGATGGAGAGTCATGTGGACCAAACAC
ACAAACCTTAGGATCCATTTCGAAGGCAGCTTTTGAGTTTGAAGATTACTTGCAGATTGTCAATGTCTTGCACAAAAGATTGGCAA
AGTTTGATCAGAGGAACTGGAGAATGGCTTATAACTCACTCATAGTTGTTGAACATTTGCTCACTCATGGACCAGAGAGCGTCTCA
GATGAGTTTCAAGGCGATAAACATGTTATCTCGCAAATGCAAACCTTCCAACAGATCGACGAGAAAGGGTTCAATTGGGGACTATC
TGTTAGGAGGAAATCAGAGAAGGTTTTGAAGCTACTTGAGAAAGGAGATTTGCTCAAGGAAGAGAGGAAGCGAGCTCGCGAGCTGT
CTCGAGGGATTCAAGGTTTTGGTAGCTTCAACCGCAAGCCTTCAAAGAATGAAGTCCTACAAGAATCTTCAACCTATACCAAGTAC
ATTGAAGATGACCAAGAGATCAACAACACAATGGTTTCTCCTAATGTCACCGGCCACTTCCCTCAGCCGTTGGTGATTGAGGGGAA
CGAGGAATCCGGGAAGAGTATGAAAGAAAATATGGATCCTGAAGATGAGGAAAACACAGAGATAAACCCACTTTTGGGTTGTGATA
AAAAGGAGGGTCAAGATCTAGTAGAAGAAGAAGAGAACCATCCATTTACGGATGGTGAAAATAAGCATATCGTCTCATTGCTTGAT
TAGAACACAAGTTGAATATTGTTATAAATGAAATCTCGGCATGTATGTAATGTTTTGTATACCAAAATGTATACAAATATAATAAT
AACACTCTGTTAGTTACTGATATGTGTTTTTTTAAATGATTTACTTCAAAAGCAAGATTATATAATAGTAAACAATGAAGAAGAAG
AAGAATAACCGAAAACACAGAGAAGACAGGTAAGCAATGATGGAAACTGGCTTTAGGGTGAAAAAAATGATTAATCATCACTTTGG
TGAATTTGATCAGAAGCACTTTCTGTGGACAATCGACGGTCCAGATTCGTCATACTCAGCCTTTGCAATCCACATCTGCTGGAAAG
TACTGAGGGAAGCCAAGATAGAGCCACCGATCCAGACACTGTACTTCCTTTCCGGTGGAGCCACCACTTTGATCTTCATACTGCTT
GGAGCCAACGCGGTGATCTCTTTACTCATCCTATCACCAATCCCACCGAACATTGTGGTTCCACCACTGAGCACAATGTTCCCATA
AAGATCCTTCCTGATATCCACGTCACATTTCATGATCGAGTTGTAAGTAGTTTCATGGATCCCTGGATTTTCCATTCCGATCATCG
ATGGCTGGAACAAAACTTCAGGACATCGGAAACGCTCTGCCCCGATGGTTATCACCTGACCGTCTGGCAGCTCGAAGCTCTTTTCG
ACAGATGAGCTGGTGTTGGAAGTCTCGAGCTCTTGCTCGTAGTCCAAGGCAATGTAAGAGAGCTTCTCCTTCATGTCTCTGACGAT
TTCACGCTCAGCAGTTGTGGTGAAGGAGTAACCACGCTCTGTTAAGATTTTCATGAGGTAGGCCGTCAGATCACGACCTGCAAGGT
CGAGACGCAAGATTGCGTGTGGAAGAGCATAACCCTCGTAGATTGGAACCGTGTGGCTCACACATCTCCAGGGTCAACACAATACC
AGTAGTACGGCACTGGCATATAGGAGAGACAGCTAAATGCGACATACATAGCAGGGTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_190236 actin-12 [Arabidopsis thaliana]11002e-117
NP_200745 actin 4 [Arabidopsis thaliana]10965e-117
AAM65657 actin 4 [Arabidopsis thaliana]10965e-117
AAO42312 putative actin 4 [Arabidopsis thaliana]10912e-116
ACJ84552 unknown [Medicago truncatula]10643e-113

Swiss-Prot top hits (Blast detail)Scoree value
P53497 Actin-1211008e-119
P53494 Actin-410962e-118
A2XLF2 Actin-110594e-114
Q10DV7 Actin-110594e-114
O81221 Actin10551e-113

TrEMBL top hits (Blast detail)Scoree value
Q84W24 Putative actin 410911e-116
B7FIH3 Putative uncharacterized protein10642e-113
A5BXV1 Putative uncharacterized protein10623e-113
Q9M5A0 Actin 110614e-113
C3TX68 Actin10605e-113

Arabidopsis top hits (Blast detail)Scoree value
AT3G46540.1 epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related12091e-132
AT3G46520.1 ACT12 (ACTIN-12); structural constituent of cytoskeleton11015e-120
AT5G59370.1 ACT4 (ACTIN 4); structural constituent of cytoskeleton10971e-119
AT5G59370.2 ACT4 (ACTIN 4); structural constituent of cytoskeleton10971e-119
AT3G12110.1 ACT11 (actin-11); structural constituent of cytoskeleton10551e-114

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  7%
 
101  7%
 
95  36%
 
113  21%
 
74  29%

Unigene MembersMember information