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Information for unigene UN21421
| FASTA Sequence |
| Unigene ID: UN21421 | Length: 907 |
| SNP | GGAACTTTCGTCTCTAAGAAACAAAAATAAAAATAAAATGGCTTCGATGGGTGTTGGCTTACGTGTCACATCTCCCGCCGTTCTCG
AAGGAAGCGTGAAGATCAACGGCTCTAGCCGTCTGAACGTAACCGGAAGAGTAACGGTGGCTCAAAGGTCTGGACTTGTCGTCAGA
GCTCAGCAGAGCGAGGCGGCACCAGAGACTACTCGAAGGTCTGTGATTGGGCTCGTGGCTGCTGGTTTAGCCGGTGGCTCGTTTGT
TCAGGCCGTTCTCGCCGATGCTGTTCCTATCAAAATTGGCCCTCCTCCACCTCCCTCCGGCGGTCTTCCTGGGACAGATAACTCAG
ACCAAGCGAGAGATCTGAAACTGGCGTTGAAGGAAAGGTTTTATTTACAGCCATTGCCACCGACGGAAGCTGTGGCTAGAGCCAAA
GAATCTGCCAAGGAGATCGTGAATGTGAAGTCATTGATCGACAAGAAAGCTTGGCCATATGTTCAGAACGATCTCCGTCTCAGGGC
GTCTTACCTCCGTTATGACCTTAACACAATCATCTCTTCCAAATCCAAGGATGAGAAGAAGTCTCTCAAGGAGCTCACTGGAAAGC
TCTTTGATACCATCAACAACCTGGACTATGCGGCGAAGAAGAAGAGTACTCCGGATGCTGAGAAGTACTATTCAGAGACTGTCTCT
ACTTTGAACGATGTTCTCGCCAAGCTTGGTTAACCATTTCGAGTCTGCATTTTTCTTTGTAAATTTATTGTGTCTTGATTTTTGTT
TCCTGAGTACTTAATACTCAAATCCCTGAATCTGAATGTGTTTCAAGTTTTTACCCCCAAAACAATGGTAATTTCTTGTGTATGCA
TTGGCCTTGCCTCAACCAAATAAATATTAAATTTAAATTCATATCGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAF81515 oxygen-evolving enhancer protein 3-2 [Brassica rapa] | 1119 | 4e-120 |
| NP_193860 oxygen-evolving enhancer protein 3-1 [Arabidopsis thaliana] | 910 | 6e-096 |
| XP_002869896 PSBQ/PSBQ-1 [Arabidopsis lyrata subsp. lyrata] | 905 | 2e-095 |
| XP_002874836 photosystem II subunit Q-2 [Arabidopsis lyrata subsp. lyrata] | 899 | 1e-094 |
| NP_192427 oxygen-evolving enhancer protein 3-2 [Arabidopsis thaliana] | 870 | 3e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplastic | 905 | 1e-096 |
| Q41932 Oxygen-evolving enhancer protein 3-2, chloroplastic | 870 | 1e-092 |
| P12301 Oxygen-evolving enhancer protein 3, chloroplastic | 738 | 2e-077 |
| P83646 Oxygen-evolving enhancer protein 3, chloroplastic | 654 | 1e-067 |
| Q0D5P8 Oxygen-evolving enhancer protein 3, chloroplastic | 654 | 1e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8CF48 Oxygen-evolving enhancer protein 3-2 | 1119 | 3e-120 |
| A9PFR3 Putative uncharacterized protein | 829 | 1e-086 |
| A9PF82 Putative uncharacterized protein | 827 | 2e-086 |
| B9HYU5 Putative uncharacterized protein | 825 | 3e-086 |
| C6SXP3 Putative uncharacterized protein | 795 | 9e-083 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G21280.1 oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ) | 918 | 3e-099 |
| AT4G21280.2 oxygen-evolving enhancer protein 3, chloroplast, putative (PSBQ1) (PSBQ) | 906 | 7e-098 |
| AT4G05180.1 PSBQ-2; calcium ion binding | 871 | 8e-094 |
| AT2G01918.1 calcium ion binding | 131 | 5e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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