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Information for unigene UN21433
| FASTA Sequence |
| Unigene ID: UN21433 | Length: 1890 |
| SNP | TGCAATGCCCCAAAGTATTTGCTCACCTTTTAACGATTTCTGGTTCATAGTTTTGTTACATAGAGGGCAAGTTCTGCATTTCTATG
CATGTATATCGCCAAAGATCTAGAATACAAAGTAGAGATTATTATTTCGGGATAAGGGAAGAGGATGAATAGGCCCTGACCGCGGA
TAACATTACAGATAGCATCAGTGGAAGCTAACACGAGGTCAAAACCATGAGATATGTAAGAAGATTGTCAAAGGGGGTGGTGTCTC
TTAGATAACAGTTCCACTAGGAATGAGAGCATCCTTGATCACTGTAACAATGCCGCTCTTGATGAAGTATCCATCCGTCTCTCTGG
CAGCTTCTTGCACATTGTCCGTGTTGATGATCTTGACGTTGTCACCAATACGAGCATTCTTGTCAATGATAGCTCTTTTAATGTGT
GAGTCTCGGCCAATGCCAATCGGAATGCTGCCTTTTGCAGCCAGGAGTGTCCTATCCGCATCAGTCTCGTAGTAGTCTGCACCCAT
CAACAAGGTGTCTTCTATTATAGCACCCTCCGATATGCAAGACCGAAGACCAATCACGGAATGGTGGATTTTGCAATTCTTGATGA
CACAACCTTCACCGATCACACTGTCGGTAACATCAGCATCAAGCATCTTGGATGGAGGTAAGTACCGAGGCTGTGTGTAGATTGGT
GCTGAACGGTCGTAGAAGCTGAAATCTGGTACTGGTTTCTTGGTGATCCCAAGATTAGCATTGTAAAACGCCTCAATGGTACCAAT
GTCTTCCCAATACCCATCATACAGATAAGCTTGCACTCTCAGTCCGAGATCAGTAGCACCAGGGATAACTTCACTCCCAAAGTCAT
TAGCTCCAGGGAACTGGTCTCTAAGCAAGTCCAACATCACATTCTTGCTAACAACATATATTCCCATACTAGCAATAAAAGGCATC
TCTTTGGCTCTTTCGTCATCAAGTCCCAAGATTGTTGTATCAACCTTCATAGCCTTTAACTGCTCTCCTTTAGGCTTCTCAGCAAA
CTCAATGATCCTTCCTTCGTCATCAATCTTCATGAGACCAAAAGCCGTGGCACGCTTCTCATCCATAGGAAGAGCAGCAACAGTGA
TATCAGCGTCGGTCTCACGATGCGCTTGAATGAACTTCTCGTAGTCCATACGGTACAAGTGATCGCCAGCAAGAACCAAAAACTCC
AACACATTGTGCTCTTCGAACAGCCACAAGTACTGCCTCACGGCATCAGCAGTCCCCTGAAACCAGTTAGGATTCTCGGGACTCTG
CTGAGCAGCAAGAACCTCGACGAAGCCTTCGTTCTTGTAACCACCCATGTTGCTGGCGTAGGCTCGGGAGAGATGACGGTTGAGAG
AAGCGGAGTTGAACTGAGTAAGGACGTAGATCTTGGAGATGTTACTGTTCAAGCAGTTGCTGACTGGGATATCGATGAGACGGTAG
TTAGCGCCGAGAGGAACAGCTGGTTTCGCTCTCTTCTTCGTCAGAGGATACAGTCTCGTTCCAGCACCACCTCCCAGAATTATCCC
CAACACACTTCTGCTAGCGTCAGGATCAAGGCAGGTTTGTGAGTTTTGCGAGTCCGAAACTGCTTTTGGAGAGACGATCGATGGTG
CTCTTCTCTCATTGCGACGTGGGAGGTTGGAGATGATCTTCTCCTGCTGCGTGGGGTTGAGTTTCTCTCCGGTAAGAGAAGACGAC
GAGAAGGAGAGAGTCTTCCGTTGAGAAGATGATGATGCTCTACGGGTGTGGTTCGAGGAAGGAACTGTTAAGGATCCGATTGCAGC
CATTGTTGCCATTGTTGGTTGTTCGAGAGGAGGAGCTTCACTCTTCTTCACTCTTCTTCTACTTCTGTCGCTATTATTGTGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q9M462 RecName: Full=Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic; AltName: Full=ADP-glucose pyrophosphorylase; AltName: Full=ADP-glucose synthase; AltName: Full=AGPase B; AltName: Full=Alpha-D-glucose-1-phosphate adenyl transferase; Flags: Precursor | 2595 | 7e-291 |
| AAK27684 ADP-glucose pyrophosphorylase small subunit [Brassica rapa subsp. pekinensis] | 2504 | 3e-280 |
| XP_002885739 glucose-1-phosphate adenylyltransferase [Arabidopsis lyrata subsp. lyrata] | 2460 | 3e-275 |
| XP_002524583 glucose-1-phosphate adenylyltransferase, putative [Ricinus communis] | 2356 | 4e-263 |
| XP_002321214 predicted protein [Populus trichocarpa] | 2352 | 1e-262 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M462 Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic | 2595 | 3e-292 |
| P55228 Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic | 2328 | 3e-261 |
| P23509 Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic | 2325 | 6e-261 |
| P52417 Glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic | 2311 | 3e-259 |
| Q42882 Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic | 2302 | 3e-258 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9AT46 Glucose-1-phosphate adenylyltransferase | 2504 | 2e-280 |
| B9SF14 Glucose-1-phosphate adenylyltransferase | 2356 | 3e-263 |
| A9PF44 Glucose-1-phosphate adenylyltransferase | 2352 | 8e-263 |
| Q0MSF8 Glucose-1-phosphate adenylyltransferase | 2350 | 1e-262 |
| B6RQ84 Glucose-1-phosphate adenylyltransferase | 2343 | 8e-262 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G48300.1 ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE 1); glucose-1-phosphate adenylyltransferase | 2329 | 2e-262 |
| AT5G19220.1 APL1 (ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1); glucose-1-phosphate adenylyltransferase | 1355 | 2e-149 |
| AT1G27680.1 APL2 (ADPGLC-PPASE LARGE SUBUNIT); glucose-1-phosphate adenylyltransferase | 1314 | 9e-145 |
| AT4G39210.1 APL3; glucose-1-phosphate adenylyltransferase | 1210 | 1e-132 |
| AT2G21590.1 APL4; glucose-1-phosphate adenylyltransferase | 1206 | 3e-132 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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