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Information for unigene UN21440
| FASTA Sequence |
| Unigene ID: UN21440 | Length: 1679 |
| SNP | AACTCAAAATTTTAAACCGATGATAGATATATTTTTTTAATTCGTAGCAAATAAAATATCACAAACTTTTCATTCTTCAAAAGGTC
AGAATCTTAAAAGAACAAATCTAATAAACCTTAAAAAAGTTAAAACACAGCATCATAGAGATAAGTTTAATAGATATGGTATTGTC
ATTCCCATGTAGCAGAGATCATGGAATTGGCAACACCAGATTGCTCCAAGGTCAAGTTAGACTCATACTCCAATGTCTTTGATTCA
CCTGGAATCGCCTGTGTTAGCTTCAGTGGCTTCTTCCTCTCTGATTCCTCAAGCTGAGAATAGCAGAACGACCAGAGAAGCTGAAT
TGAGTCGGTTTTGAGGAAGTTCCTCTGGACTCTCTGTCCGTTTGGTAAACGTATCCCGACTCTGCACTGAACGCTGCGGTCGCCTC
CCTTTGGTTCTTCAGGCAGAGGTGGGAATGTTGGCAGCACCGTTGTTGTAACAGCTTCTTCAACCGCTACTACTTCTTCAGGCGTT
ATTGCTGATTTATTATCATCTGAAGATTCTTTCATGTCGTTGTCTTCCAAGGAAGCAGCCAATGCTCGTTGCAGTTCTGCTTCTTC
ATCATCATCTTTCGTTACAACCTCTTTGGGTTTGGAATGAGGAGCCAATGAGAAGCTGCCTCTTGGACGTTTCTTTGAGAGAGAAG
CAAAGTGTTCACGAGGACCACCGTCCATGAAGGGCACTAAATCCTCTAGCAGATTCTCTGGTTCGACCATTCCAGACCACATTCTC
ATCTTTTGACCAGTTGTAGGATCAATTACAAGCACCACAGGGATGGATTCGAGCTTGTAGTATGTGCAAACCTTCTTTCCTTCCGT
GGTATCATCATAGACCTGCCAGAAGATGAAGTTGGCCTTGATAGTCTGAGAAACAGCTTCATTTGCCCATGTATCTCGATTTAGCA
TGTGAGAGCTGAACTCCGTGGTAGATTGGAGGTTAACGAGAAGCCATTTATCCTGAGAGCTAGACGTAGCTTTTGCCTGTTCAAAG
GAGCCGTGTAACATAAGATGAAAAGGAGGACGGTACAAGGAGGCCAAGCTATCCCGAGGAGCTGATGCTGCTGCCTCTGGCGCAGA
AGCTGAGCCAGATGCAGAGGCAGAGGAAGCACCAACCTCATCTGGCTCCCAAATTCCAGGGCTTTTTGGCTCTTCGCTGAAGTTAC
GGAAAGCAATCAAAGAAGCTGGTTCCCGCTGAGAGTTTCCCACCCTCGTTGCTCCGTAATACATAGAGTCACCATAAAGAGTCTCC
CTCACAACAGGTAAAGGAGCACGCACTTCATCATCTACTACATCGTTCTGCATCCTTTCATTTCCTGTATCAGCCGCCCCCCAAGA
CTGTGCAGCCATTGGATCGTCCACCGTTGGCTGAGTGTTTGTACCAGAAGGAAGAATACCACCTTCTCCTCCGACATAGAAAAGCT
GAACTGCTTCCTCAAGTTTCCAGCTTGTTGCCTCTAAGAACTGACGAGCAGTTTCAGATGTCTGGCCGACAGCGATCTCGAGGAAA
GAAGAGACTAATCTCTGCTGATCACTGGGAGAGAGCATTCCCTCCATTACTGCTCAAATCCGACAAACAAACCAAACCCAAAAGAA
TCGAACTTTCTGATGAAGATGAATCTGTAGAGTCGAATCCTGCGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002890064 UBX domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 2095 | 6e-233 |
| NP_563954 UBX domain-containing protein [Arabidopsis thaliana] | 2069 | 6e-230 |
| AAF63167 T5E21.7 [Arabidopsis thaliana] | 1615 | 3e-177 |
| NP_001077535 UBX domain-containing protein [Arabidopsis thaliana] | 1550 | 9e-170 |
| XP_002274120 PREDICTED: hypothetical protein [Vitis vinifera] | 1323 | 2e-143 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O14048 UBX domain-containing protein 2 | 319 | 2e-028 |
| O94888 UBX domain-containing protein 7 | 314 | 8e-028 |
| Q5REY7 UBX domain-containing protein 7 | 314 | 8e-028 |
| Q6P5G6 UBX domain-containing protein 7 | 313 | 1e-027 |
| Q55BU7 UBX domain-containing protein 7 homolog | 273 | 5e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94JZ8 AT1G14570 protein | 2069 | 4e-230 |
| Q9MA26 T5E21.7 | 1615 | 2e-177 |
| A8MRH0 Uncharacterized protein At1g14570.3 | 1550 | 6e-170 |
| B9S7A4 UBX domain-containing protein, putative | 1300 | 6e-141 |
| B9HVN3 Predicted protein | 1271 | 1e-137 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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