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Information for unigene UN21446
| FASTA Sequence |
| Unigene ID: UN21446 | Length: 2043 |
SSR | | AATAAAAAAAAGATGGTAGATTCTTTTCTTTCTGAGTTTCAGTCTAAGTACACTGCAAACTTGTGATACACGTAAGCTCCACAGGT
TTTTATTCTTTCTTATCCCATGTTTAATAAGATATTAAGACACAGTGACAACAACATGGAAGAAGCATATACACTTTAGTGAGTTT
AAGTGACTTTTTAATCAACACTTGCTTATTGTTCCTTTGCATCAATCATACTTGCTCAAACTTGGGCTCCTCATCATATTCCCATT
TTCTTCTTTTTGAAGAATCATCTCTCATCCCCACCTTAGGGAGAGAAGAAAGAGTGAGGGAGAACTTTGTATGGATTGAGAATCCC
CTTAGGGTCCAGCAACTTTTTGATGGATACCATTAATGCAACGGTTTCTGGTGATTTGCTGTAGAAGATTTCATTAGCTTTCATCA
CACCTAATCCATGTTCTGCACTGATGCTTCCACGGTGCTTTGATGTCCACTCATAAACACGGTTCTATCAAACCTAAAAGCTTATC
GTTATATTCCGCGGCTGAGATGTTTAAATGAAGATTACCGTCTCCAAGATGACCATATCCCATGACATTCGCTAAGCCATCTAATC
TCCCTCTAAGGTCGTTGACAATATTGTAAATCTCTTCAACAGGTAAGGATAAGTCATACTTGTAACAAGCTCCTGCTTTCTGTAAC
GCCTCTGTTATGCCCTCTCGTATGCGCCAAAACGAGGATGCTTGGTTTATGTCTTGAGCTATCACGCCATCAGAGACTAAACCTTG
TTCCAGTGACTTTAAAAGAAACGCTTCAAGCTTCTCCCTGTCATAAGTTTCACCACTTCCTGTTGTCTCTATCAAAATGTAAAAGT
TCTCTGAAGAGGAAACTGGGTTACGGACACCGTCTAGGTGGTTAAGTACCAAATCCATGGAGTTGTTATCAAGAAACTCGAAAGCG
GACAGTATCTCTCCAAGATTTCTCTTTGCTTCAACAAGAAGTTTCTGGCAGCTGAGAAAGTCTTTGCAAGCGATGAAGGCTAAGTT
TACAGAAGACATCTTTGGTTGTGTGAGTATAGAAACTTTAGTCACAATACCAAGTGATCCTTCACTACCGATGAATAAATGTTTTA
AGTCGTATCCAGTGTTGTCTTTGCGTAAAGTTCCAAGCATGTCAAGCACATTTCCATTTGCTGTGACAGCTTCTAGACCCAATACG
GTTCCATGAAGTGAGCCGTAACGGATAAGGCGCAAACCACCAGCATTAGTTGAAACATTTCCACCAATATGACAGCTTCCTTTTGC
ACCTAAGTCTAGAGGCATAACAAAACCTTTTGTGTCAAGGAAAGCTGCCAGATTTTCCAAAATGCATCCTGCTTCACACACCAAGA
CTCCACTAACCTCATCAAAGGACAAGACTTTATTCATCAAACCAACATTGATGATCACCTCATCAAAGACAGGCACACTTCCACCA
ACAAGACCGGTGTTTCCTCCTTGAGGAACAACAGCTAAACTCCTAGAATCACAATACTTAAGTATCTGAGACACCTCTTCTGTGTT
CTTGGGCAAGAGCATCAGATTACTAGATCCTCTGTACTTATGCATCCAATCTGTATTAGCAATCTCGAGCCTCTCTTCATCTTCAA
CCACGTGTTTCTCGCCTAGTATCTCCTTGAAGTAGCTAACGTCTCTCGGTTCCAACGAAGAAAACAATGGGTTTCTCTGGACTTTT
GAAGCTACTGATGATGATGACCCAAACGATTTATACTGCTGCATCGTCCACAAGTTTCCACCAAGACATGGATGATGATGATGATG
ATGATGATCAAGCAGCTCTGTGTTACGACCCTTCCCAGCATTTGACTCAAAGGTCTTTCCTTTTGACTCGTAACGACTAACGAAGC
CTGAAACAGAAGGAGACATTGAGTTATGTTTTTGTCGGAAACTACTTAGTGATGATTTACATGCAGATCTTATGAAATCTCCTGAT
CTTCTCCATCTATGGATCATCATCGTTCTTTTCCTTCCTTGCACTTACGTCTCCGTCTCTCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002869038 FAD linked oxidase family protein [Arabidopsis lyrata subsp. lyrata] | 2054 | 4e-228 |
| NP_568003 D-2-hydroxyglutarate dehydrogenase [Arabidopsis thaliana] | 2050 | 1e-227 |
| CAB16815 actin interacting protein [Arabidopsis thaliana] | 2033 | 1e-225 |
| XP_002310828 predicted protein [Populus trichocarpa] | 1710 | 3e-188 |
| XP_002521506 d-lactate dehydrognease 2, putative [Ricinus communis] | 1706 | 1e-187 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23240 D-2-hydroxyglutarate dehydrogenase, mitochondrial | 2050 | 5e-229 |
| B8B7X6 Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial | 1547 | 1e-170 |
| Q7XI14 Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial | 1547 | 1e-170 |
| A1L258 D-2-hydroxyglutarate dehydrogenase, mitochondrial | 1171 | 4e-127 |
| Q1JPD3 D-2-hydroxyglutarate dehydrogenase, mitochondrial | 1170 | 6e-127 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HFA9 Predicted protein | 1710 | 2e-188 |
| B9S687 D-lactate dehydrognease 2, putative | 1706 | 7e-188 |
| B4FWJ7 Putative uncharacterized protein | 1523 | 1e-166 |
| A9RFK0 Predicted protein (Fragment) | 1455 | 9e-159 |
| D0MVU6 D-2-hydroxyglutarate dehydrogenase, mitochondrial | 1234 | 4e-133 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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