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Information for unigene UN21463
| FASTA Sequence |
| Unigene ID: UN21463 | Length: 1244 |
| SNP | AGGGCTTTCACATCTCCGCCACCCCTGAAGAAAGCGATAACCCTAGCTTCACCAAGCTCACCCACAATGGCGGAAGGACTCGTTTT
GAAGGGCACGATGCGTGCACACACCGACATGGTCACCGCAATCGCCACCCCGATCGACAACTCGGACACCATCGTCTCGGCTTCTC
GCGACAAATCCATCATCGTCTGGAAACTCACCAAGGACGACAAGTCCTACGGCGTAGCTCAGAGGCGTCTCACCGGCCACTCACAC
TTCGTCGAGGACGTCGTCCTCTCCTCCGACGGCCAATTCGCGCTCTCCGGAAGCTGGGACGGCGAGCTCCGTCTCTGGGATCTCGC
CGCCGGCGTGTCCACTCGCAGATTCGTCGGACACACCAAGGACGTTCTCTCCGTCGCGTTCTCGCTCGACAACCGTCAGATCGTGT
CGGCGTCTCGCGACCGCACGATCAAGCTCTGGAACACTCTGGGCGAGTGTAAGTACACCATCGCCGAGGGAGGTGAGGGACACAAT
GAGTGGGTTAGCTGCGTCAGGTTCAGTCCCAACACGCTCCAGCCGACGATCGTGTCGGCTTCTTGGGACAAGACAGTGAAAGTGTG
GAACTTGTCGAACTGCAAGCTCAGGTCGACTCTTGCCGGCCACACTGGGAACGTCAACACTGTTGCTGTTTCGCCTGATGGTTCTC
TTTGCGCGAGTGGAGGCAAAGACGGTGTCGTTTTGCTGTGGGATTTGGCTGAGGGGAAGAAGCTTTACTCTCTTGAGGCTAACTCT
GAGATCCACGCGCTTTGCTTTAGCCCTAACAGGTATTGGCTGTGTGCTGCGACTCAGCAGGGTATTAAGATTTGGGATCTTGAGAG
CAAGAGCGTTGTTGAGGACTTGAAGGTTGATCTCAAGGCTGAGGCTGAGAAGTCTGACGGAAGTGCTACTGCTGCCAACAAAAGGA
AGGTTATTTACTGCACCAGCCTGAACTGGAGTGCTGATGGAAGCACTTTGTTCAGTGGTTACACGGATGGAGTTATCAGAGTTTGG
GGTATTGGCCGTTACTAGTTATCCCATCTCTTCTATGTCTTTCTCCTTTGTTGGTTTTATCTATCACTCTTTTGTTTTGTGAGCAA
ACTCATACACGTTGCATCATAAAGTACTCTGAAGGATATTTTGTTTTATGTCAATTTTAGGTTCGGATCTTTACTTATTTGTGAGA
ACTTGCCTTTCTAAGTTACTTCTGTTTTGTTCCTATGTGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q39336 RecName: Full=Guanine nucleotide-binding protein subunit beta-like protein | 1645 | 6e-181 |
| XP_002890259 hypothetical protein ARALYDRAFT_889221 [Arabidopsis lyrata subsp. lyrata] | 1641 | 2e-180 |
| NP_173248 guanine nucleotide-binding protein subunit beta-like protein [Arabidopsis thaliana] | 1633 | 1e-179 |
| AAB82647 WD-40 repeat protein [Arabidopsis thaliana] | 1630 | 3e-179 |
| 3DM0 Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana | 1622 | 3e-178 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39336 Guanine nucleotide-binding protein subunit beta-like protein | 1645 | 3e-182 |
| O24456 Guanine nucleotide-binding protein subunit beta-like protein | 1633 | 6e-181 |
| Q39836 Guanine nucleotide-binding protein subunit beta-like protein | 1481 | 3e-163 |
| O24076 Guanine nucleotide-binding protein subunit beta-like protein | 1469 | 7e-162 |
| P93340 Guanine nucleotide-binding protein subunit beta-like protein | 1404 | 2e-154 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C4Z6 Guanine nucleotide-binding protein, putative | 1535 | 2e-168 |
| Q9LV28 AT3g18130/MRC8_11 | 1531 | 7e-168 |
| Q8LAF2 Guanine nucleotide-binding protein, putative | 1528 | 2e-167 |
| B9SU88 Receptor for activated protein kinase C, putative | 1495 | 1e-163 |
| A5BV59 Putative uncharacterized protein | 1489 | 5e-163 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G18080.1 ATARCA; nucleotide binding | 1634 | 4e-182 |
| AT1G48630.1 RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B); nucleotide binding | 1536 | 1e-170 |
| AT3G18130.1 RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide binding | 1532 | 3e-170 |
| AT5G25150.1 TAF5 (TBP-ASSOCIATED FACTOR 5); nucleotide binding / transcription regulator | 255 | 3e-022 |
| AT4G02730.1 transducin family protein / WD-40 repeat family protein | 250 | 1e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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