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Information for unigene UN21479

FASTA Sequence
Unigene ID: UN21479Length: 864  SNP
GTGAAAAAGGTAAGCAAAATCTTAAAGGGAAGGATTTGAGAAGAGATACGAAACACAACAAATTACTGACAAAACTAATGATAAAG
GTTTTCAGATTCGGCGCAGAGTAGGTGTTTTGACAAAACTGAATCACAAAATCCATGCAAAAATCACTGCTAAAAAAAAATTACTA
TCAAGCAAAAAAGCTTATTCTCCTCACTTCTTAGACCTCTTCGCCGGGAGCTATGCGGTTTGGGCATGCGGTGCGGCGGCAGGTAC
ATCTCCTCCAGGACCCTTGGCAAGTCGTTCCTCTCTACGAGCATGTTTCCTTTCTCGGCTAGCCTTGTTCTTAGCCCTCTTAGCCT
CGAACTGATCAGACAAAGTCTTCTCCCTAGCCTTCTCAGCCTTGGATTTGTGGATGCTCTCCATCAGAACACGCTTGTTCTTGAAA
ACGTTTCCCTTGACTTTCATGTACATGTCGTGGTACATGTGCTTGTCAATCTTCTTGGACTCACGGTACTTCTTGAGAAGACGCCT
GAGAACTCTCATCCTCCTCATCCACAGTACCTTTGTTGGCAGCCTCGCCTCCCTGGTACCCTTCCTCTTACCGTAACCAGAGTGAC
GTCCCTTCATCTTGGCAATCTTCATGCGGCGAGCTCTGGAACGCGAGTGGATCTTCGTTGGCTTCCTGATGATGAATCCATCGTTC
ACAAGCTTCCTGATGTTTTGACGCGAATTGGCCATGGAGATGTCACTGGTTTCGTTAGGATCGAGCCATACTTTGCCCTTTCCGCA
CTTCATCACTGAGGCTGCGAGCCGCTTCTGGGGCTTCAGCGACACCATTTTTGCTTCTCCCTTCTGGACACTGGTTTTGGCCGAGC
CCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_192132 60S ribosomal protein L19-3 [Arabidopsis thaliana]9788e-104
NP_171777 60S ribosomal protein L19-1 [Arabidopsis thaliana]9681e-102
XP_002872849 60S ribosomal protein L19 [Arabidopsis lyrata subsp. lyrata]9681e-102
XP_002892123 EMB2386 [Arabidopsis lyrata subsp. lyrata]9643e-102
AAL58923 At1g02780/T14P4_3 [Arabidopsis thaliana]9563e-101

Swiss-Prot top hits (Blast detail)Scoree value
P49693 60S ribosomal protein L19-39783e-105
Q9SRX2 60S ribosomal protein L19-19685e-104
Q9LUQ6 60S ribosomal protein L19-28825e-094
Q3T0W9 60S ribosomal protein L196461e-066
P84098 60S ribosomal protein L196461e-066

TrEMBL top hits (Blast detail)Scoree value
Q8W101 Ribosomal protein L199562e-101
B9SAV9 Ribosomal protein L199283e-098
B9I4Y2 Ribosomal protein L199241e-097
B7FHF4 Ribosomal protein L199231e-097
B9H3I4 Ribosomal protein L199203e-097

Arabidopsis top hits (Blast detail)Scoree value
AT4G02230.1 60S ribosomal protein L19 (RPL19C)9792e-106
AT1G02780.1 emb2386 (embryo defective 2386); structural constituent of ribosome9693e-105
AT3G16780.1 60S ribosomal protein L19 (RPL19B)8833e-095
AT4G16030.1 structural constituent of ribosome2122e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
116  23%
 
81  4%
 
125  19%
 
108  31%
 
74  15%
 
61  4%
 
91  4%

Unigene MembersMember information