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Information for unigene UN21490

FASTA Sequence
Unigene ID: UN21490Length: 1209  SNP
ATTTATCATTGTTTATGTGGTAATTTATCATTGTCTAGAGAGTACACTTTGAATATCTCAACAACATTCTTACCAAACTCTTAACA
TTCATTATTAAATAGAACAATTCGCTTTTGATAGGTGGCGTGATAATTAACACAACATCATCGTACAGATAAAAGACATACTGCTA
CTTATTTCTTCTCACGCCATTAAACCAAATCAACAAGCCTTAAGTGGGGTCCCACAAAGACAGAGGTTGTGAGAGAAAGCAGATGG
TTCAAATGTCTGAAGGAGACCACCACGTGGGATTTTTCCGCATAGATGATTGTAACTAACGTCGAAATGCTCGAGACGCAGCTTAC
TCAGCTCCCTAGGAAACTTCCCGAAGATTTTGTTATGGCTCAGATCCAACGACACTATGCTCCTAGCAAACTTAACCTTGGCGAGA
TCGAACTCAAACATGTTCCTGGATAGATTCACACGTATTGTTGTTTTGTTACGTCCGAAAAACATCGAACCATCTCCTGTGAAGCC
GTTTCCCGACAGATCCACTGCGTTAAAGTCGTACTTTGACAACGATTCCGGTACTTTTCCTGAGAGCTTATTGTTAAACAGGTAGA
GATTAGGAACGGTGCCTACAAAAGAACCGAAAGAGTCTGGTATAGAACCGGTTAACTTATTATCGTTGATCTGAAGGGCTCCTAGC
TTCGGCATCTGAGAAATCGAACCGGGAATTGGACCGGTAAACTGGTTAAAGGAAAGGTCTAAGAACGTAACGCTCTTGAGCTCGCT
GACGAAATCAGGAATTGAACCAGAGAGATTGGTCTCCTTTAACCGGAGGAGGTCCAGGTACTTGAGTTTGGTGATAGTGTGTGGAA
TGTTCCCAGTGAGATGAGTCAAGTAACTGAAGTCAAGCGTACGGAGCTCAAGGAGGTCGCCGATCTGAGCAGGGATCTGGCCGGAA
ATTTCGCCGGAGGAGATGGTGAGGGCGGTGACACGGCCGTTGGTGCACTCGACGCCAGTCCAGGTGGTGCAGAAGTCGGTTTGTGG
GTTCCAGGAGGAGAGGAGTGGAGGGTTGTTTAAGGCTTTCTTGATTTCGAGGAGGGCAATCTTGTCATTCGAGGAGGAGCTGTGAG
AAGATGGGAGAGAGATGAAGAGTATGGAGAAGAAGACAGAGAGATGAAGAAGGAACTTCATTGTGATTTTGAGTGGTTGTGTTCTG
AGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACX42230 polygalacturonase inhibitory protein [Brassica rapa subsp. campestris]15991e-175
XP_002884889 leucine-rich repeat protein FLR1 [Arabidopsis lyrata subsp. lyrata]13947e-152
NP_974291 polygalacturonase inhibitory protein-like protein [Arabidopsis thaliana]13803e-150
AAL15279 At3g12148/T23B7.11 [Arabidopsis thaliana]13742e-149
AAF65195 leucine-rich repeat protein FLR1 [Arabidopsis thaliana]13562e-147

Swiss-Prot top hits (Blast detail)Scoree value
Q9M5J9 Polygalacturonase inhibitor 18773e-093
A7PW81 Polygalacturonase inhibitor8711e-092
Q05091 Polygalacturonase inhibitor8487e-090
Q9M5J8 Polygalacturonase inhibitor 28163e-086
P58822 Polygalacturonase inhibitor 26498e-067

TrEMBL top hits (Blast detail)Scoree value
D0EWF2 Polygalacturonase inhibitory protein15999e-176
Q9LH52 Leucine-rich repeat protein FLR113802e-150
Q93ZC1 At3g12148/T23B7.1113741e-149
Q9M7E7 Leucine-rich repeat protein FLR113561e-147
Q8L9Q0 Polygalacturonase inhibiting protein 18802e-092

Arabidopsis top hits (Blast detail)Scoree value
AT3G12145.1 FLR1; enzyme inhibitor/ transcription factor binding13819e-153
AT5G06860.1 PGIP1 (POLYGALACTURONASE INHIBITING PROTEIN 1); protein binding8773e-094
AT5G06870.1 PGIP2 (POLYGALACTURONASE INHIBITING PROTEIN 2); protein binding8163e-087
AT1G25320.1 leucine-rich repeat transmembrane protein kinase, putative3073e-028
AT1G35710.1 leucine-rich repeat transmembrane protein kinase, putative2993e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  13%
 
108  35%
 
83  13%
 
112  9%
 
122  9%
 
182  9%
 
73  13%

Unigene MembersMember information