Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN21501

FASTA Sequence
Unigene ID: UN21501Length: 775  SNP
GGGGGTAAAATCGCCAACTGGTCTTTCTCGATCTGGGTGGGAACCGAACCATCTATCGACTCTCGCGAGCTCTCTTGTCTCCTCTG
CTGCGATCTCTCTCCTCTTCTCTCTATCAGCGCACCAAATTGTGAGACTTTTGGCGGGAAAAATGTCGGGGAAAGGAGCTAAAGGA
TTGATAATGGGGAAACCCAGCGGTAGCGAGAAGGATAAGGACAAGAAGAAACAACCCATCACCCGTTCTGCTCGAGCTGGTCTTCA
GTTCCCTGTAGGAAGGGTGCATAGGCTGTTGAAGACAAGGTCCACTGCTCACGGAAGGGTTGGAGCAACTGCAGCTGTTTACACCG
CAGCGATACTTGAGTATCTGACCGCAGAAGTTTTGGAGTTGGCTGGTAACGCTAGCAAGGATCTCAAGGTGAAACGTATCTCCCCG
AGGCACTTGCAGCTAGCGATTCGTGGAGATGAAGAGCTCGATACTCTCATCAAAGGAACTATAGCTGGTGGTGGTGTTATCCCTCA
CATCCACAAGTCTCTCATCAACAAATCCGCCAAGGAATAATAGATTCTTAACCACTCGCCCTTACTTCTCTGTTTCTTTTAAGTAT
CTCTCTCGAGAGAGAGTCTGTGTTTGATAAAAGAAGAGACGCTAGTGAGAGAGCTCTTTGTTTAGGATGGATCTCTTTGTGTTATG
CCTATGTATTTGATGATTATCTAAAACTCATTTTCTGACTAGAAGCTTGTAAGCAAATCAGTGGGTAAAGATTTGTGTTTTTCTCT
G

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175683 histone H2A protein 9 [Arabidopsis thaliana]6443e-065
XP_002885097 hypothetical protein ARALYDRAFT_341690 [Arabidopsis lyrata subsp. lyrata]6141e-061
XP_002529367 histone h2a, putative [Ricinus communis]5979e-060
ACU14550 unknown [Glycine max]5906e-059
ACU14444 unknown [Glycine max]5906e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q9C944 Probable histone H2A variant 36442e-066
O23628 Histone H2A variant 15733e-058
Q8H7Y8 Probable histone H2A variant 15698e-058
Q8S857 Probable histone H2A variant 25572e-056
Q84MP7 Probable histone H2A variant 35411e-054

TrEMBL top hits (Blast detail)Scoree value
B9STP8 Histone H2A5976e-060
C6SYX1 Histone H2A5904e-059
C6SZ77 Histone H2A5904e-059
A5AKG7 Histone H2A5895e-059
A9NMZ1 Histone H2A5833e-058

Arabidopsis top hits (Blast detail)Scoree value
AT1G52740.1 HTA9 (HISTONE H2A PROTEIN 9); DNA binding6503e-068
AT3G54560.1 HTA11; DNA binding5742e-059
AT2G38810.1 HTA8 (HISTONE H2A 8); DNA binding5348e-055
AT2G38810.3 HTA8 (HISTONE H2A 8); DNA binding5348e-055
AT2G38810.2 HTA8 (HISTONE H2A 8); DNA binding5348e-055

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  26%
 
94  21%
 
111  5%
 
127  37%
 
102  11%

Unigene MembersMember information