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Information for unigene UN21518
| FASTA Sequence |
| Unigene ID: UN21518 | Length: 2223 |
| SNP | CTTTCGAGTTCTTCCTCATCAGAGACGAAGCTTCACCTCCGTTCTTCGTCCTTCTTCCGCCGCGTCTAATCCCTCTCAAATCCACT
CGTCCCGTCGATTAAGTTTCCTCGGAGGTTTTGAGCAATAGGTTGAGCTAACTCACTAACTATGGACCTTCTACCTCCGCCGAAAT
CAACAGCCACCACGTTCTACGACCACTCGAACGATCCATGGTTCAAAAACCGTTTCACCGAGTCCGAATCCTCCGAGAAAACCGCC
GCCGTGGCTTTCAAAGCGGTGCCTCTTTACCTGAAACGGCAAGGCTTCCGTCCCAGGAACCCCGAGGACTTTGGAGACGGTGGTGC
TTTTCCTGAGATACACGTTGCTCAGTATCCACTCGGGATGGGTAAGAATAAGTCTAACAAGCCTGGGTCCAAGACTCTCCCCGTTA
CTGTGGATGCTGAGGGGAACGTGGTGTTTGATGCTATTGCGAGGCAGAACGAGAACTCTAAGAAGATTGTTTACTCTCAGCATAAG
GATATTATCCCCAAGGTGCTGAAGAACGATGGGGGAGAGGATGGTGTTGTGGATGAAGAGGAGGAGTTGCAGAGGCAGATTCAGGA
GACTACGGAAGAGACTAAAGCTGCTATGGAGAAGATTGTGAATGTGAGGCTGAGTGCTGCGCAGCCTACTAATGTACCCAGGCAAT
CTGGTGACTCGCAGTATATTAAGTATAAGCCGTCTCAGCAGTCTTCGGCTTTTAATTCAGGGGCTAAAGAGAGGATTATTAGGATG
GTGGAGATGCCTGTAGATCCACTTGATCCGCCAAAGTTTAAGCACAAGAGAGTCCCGAAGGCTTCTGGCTCTCCTCCTGTTCCGGT
CATGCATTCACCGCCCAGGCCTGTTACTGTTAAGGACCAGCAAGACTGGAAGATCCCTCCTTGTATCTCAAACTGGAAGAATCCGA
AAGGTTACACTATACCTCTTGATAAACGTCTTGCTGCTGATGGGAGAGGTCTACAAGACGTTCAGATCAATGATAACTTTGCCAAG
CTATCCGAGGCTCTCTATGTAGCTGAGCAGAAAGCTAGAGAGGCTGTTTCGATGCGGTCAAAGGTGCAGAAGGAGATGATGATGAA
GGAGAAGGAAAGAAAAGAGCAGGAGTTGAGGGCTCTTGCTCAAAAAGCTCGTTCTGAAAGAACTGGTGCTCCTGCGAGTATGCCTG
TCTCTGTAGACAGGGCTAGGAGTGAAAGTGTTGACCCAAGAGGTGATTATGAGTATGACCATGACCGCGACCGTGAGAGTGAGAGA
GAGAGGGAAAGGGAAAGAGAGAGGGATGGGCCAAAGGAGAGTAGAGAGGAGATGGAAGAGCGGATAAAGAGGGATAAGATAAGAGC
AGAGCGTCGCAGGGAAAGAGAGAGGGAGAGAAGGTTGGAAGCTAAAGATGCTGCCATGGGGAAGAAGAGCAAGATCACGAGAGACA
GAGACCGTGATATCAGTGAGAAAGTCGCTCTTGGAATGGCCTCTACAGGAGGAGGCAAAGGCGGCGAAGTTATGTATGATCAACGA
CTCTTCAACCAAGAGAAGGGAATGGATTCAGGTTTCGCAACCGACGACCAGTACAACGTGTACGACAAAGGCTTGTTCACCGCACA
GCCCACTCTCTCAACGCTCTACAAGCCTAAGAAGGATACAGATGAAGAAATGTACGGAAACGCAGACGAGCAGCTCGATAAGCTCA
AGAACACCGAGAGGTTCAAACCAGACAAAGCTTTCACCGGTGCTTCCGAGCGGTCGGGCAAGAGAGAACGACCTGTGGAGTTCGAG
AAGGAAGATGAACAAGATCCTTTCGGTCTGGACCGTTTCGTGTCCGATGTGAAGAAAGGTAAGAAGCCTTTGGACAAAATCGGGTC
TGGTGGAACGATGAGAGCTAGTGGCGGTGGCGGAAGCTCTTCTCGTGATGACTATGGTGGTTCTGGTCGTACCAAGATCAATTTCG
AACGCAGTTGTCGTTAGAAAGTCTCATCAATCTGATGTTTCGATTCCAAATACATGGTTTGTTGCTGTTTGGCTTCTTATTTGGAT
ATGTGGAAACAGTTTGCTTTTGATTCAGTATTTATGTCGTAGTAAGGCTCTAAAACTTGTCAAATACTGTCTTTCACAACTTTCTA
TGTTTGGATCTTTAAGAAGAGTTTGAGCTTTATTTCATAATAAAGACTGTATTTTTATGTTTGGTTTTTACTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889128 hypothetical protein ARALYDRAFT_476882 [Arabidopsis lyrata subsp. lyrata] | 2769 | 6e-311 |
| NP_565151 chromatin protein family [Arabidopsis thaliana] | 2722 | 2e-305 |
| BAD44230 unknown protein [Arabidopsis thaliana] | 2715 | 1e-304 |
| XP_002283858 PREDICTED: hypothetical protein [Vitis vinifera] | 2349 | 3e-262 |
| XP_002454583 hypothetical protein SORBIDRAFT_04g033860 [Sorghum bicolor] | 2288 | 4e-255 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5KCF5 Pre-mRNA-processing protein 45 | 1077 | 4e-116 |
| Q09882 Pre-mRNA-processing protein 45 | 1030 | 1e-110 |
| Q1JQE0 SNW domain-containing protein 1 | 942 | 2e-100 |
| Q5R7R9 SNW domain-containing protein 1 | 942 | 2e-100 |
| Q13573 SNW domain-containing protein 1 | 939 | 4e-100 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O80653 At1g77180/T14N5_5 | 2722 | 1e-305 |
| Q67YK1 Putative uncharacterized protein At1g77180 | 2715 | 7e-305 |
| Q3I4X9 GAMYB-binding protein | 2291 | 1e-255 |
| C5XSR7 Putative uncharacterized protein Sb04g033860 | 2288 | 2e-255 |
| B6UCY8 Pre-mRNA-splicing factor prp45 | 2277 | 5e-254 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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