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Information for unigene UN21564

FASTA Sequence
Unigene ID: UN21564Length: 2663  SNP
TCTCGCGTTATCTTTGTGTGTTCTTTTCATTTTGCTTAAGAGATGGTGGCGTCAGCTTTTCTCCCGGAGCTCTGGACGGAGATCCT
CATTCCCGTCTGCGCGGTGGTCGGCATCGCTTTCTCCCTCTTCCAATGGTTCATCGTCTCTCGCGTGAGTGTCTCCGCTGACCAAG
CCGCATCGTCGTCTTCGTCTTCTTCAGGAGGTGCGAAGAATGGCTACGGAGATTCCCTTATCGAGGAAGAGGAAGGTGTCAACGAC
CAGAGCGTCGTCGCCAAGTGCGCCGAGATTCAGACAGCTATCTCCGAAGGTGCAACTTCGTTCCTGTTCACGGAGTACAGATACGT
CGGCGTCTTCATGGTCATCTTCGCCGCTATAATCTTCGTCTTCCTCGGCTCCGTCGAAGGGTTCAGCACGGAGAACAAGCCTTGCA
CCTACGACGAGACCAAAACCTGCAAACCCGCGTTAGCCACCGCGGCTTTCAGCACAATCGCTTTCGTCCTCGGCGCGGTCACCTCC
GTGCTCTCTGGCTTCCTCGGCATGAAGATCGCCACCTACGCCAACGCGAGAACCACCTTGGAAGCTAGAAAAGGCGTTGGAAAGGC
CTTCATCGTTGCCTTCAGGTCCGGCGCCGTGATGGGGTTCCTTCTCGCCGCGAGTGGTCTCTTGGTGCTTTACGTTACCATCAATG
TGTTCAAGATCTATTACGGTGATGACTGGGAAGGTCTTTTCGAGGCGATTACTGGTTACGGTCTTGGTGGTTCTTCCATGGCTCTC
TTTGGACGTGTCGGTGGTGGGATCTACACTAAAGCGGCTGATGTTGGTGCTGATCTCGTCGGTAAAATCGAGAGGAATATTCCGGA
AGATGATCCAAGGAACCCAGCTGTCATTGCTGATAATGTGGGTGACAACGTTGGTGACATTGCTGGTATGGGATCTGATCTCTTTG
GATCATACGCTGAAGCATCGTGTGCTGCTCTCGTTGTTGCTTCCATCTCTTCCTTTGGAATCAACCATGACTTCACCGCCATGTGC
TACCCGTTGCTCGTTAGTTCAATGGGTATCTTGGTCTGTTTGATCACTACTCTCTTCGCTACCGACTTCTTTGAGATCAAGGCTGT
TAAGGAGATCGAGCCGGCGTTGAAGAACCAGCTCATCATCTCGACTGTTATCATGACCGTTGGTATTGCTGTTGTGTCATACGTCG
GCTTGCCTACTTCCTTCACCATCTTCAACTTTGGAACACAAAAAGTCGTTCAGAACTGGCAGCTGTTCTTGTGTGTTTGTGTTGGT
CTTTGGGCTGGACTCATCATTGGTTTTGTCACCGAATATTACACTAGCAACGCCTACAGTCCTGTGCAAGATGTTGCAGATTCATG
CAGAACTGGTGCAGCCACCAATGTTATATTCGGACTGGCTCTTGGTTACAAATCCGTAATTATTCCCATCTTTGCGATTGCTGTCA
GTATATTCGTCAGCTTCAGCTTTGCTGCTATGTATGGTGTTGCCGTTGCTGCTCTTGGGATGCTCAGCACCATCGCAACTGGTTTG
GCGATCGATGCTTACGGTCCCATCAGTGACAACGCTGGTGGTATTGCTGAGATGGCTGGGATGAGCCACCGTATCCGCGAAAGAAC
CGATGCTCTTGATGCAGCTGGAAACACCACTGCCGCTATTGGAAAAGGGTTTGCTATCGGATCTGCTGCGTTGGTCTCGTTGGCTC
TGTTCGGTGCCTTTGTGAGCCGTGCGGGAGTCCACACCGTAGATGTTTTGACTCCTAAGGTTATCATTGGGCTGCTTGTCGGTGCC
ATGCTTCCTTACTGGTTCTCGGCCATGACGATGAAGAGTGTGGGAAGTGCGGCTCTTAAGATGGTTGAAGAAGTTCGCAGGCAGTT
CAACACCATCCCTGGACTCATGGAAGGTACCGCGAAACCTGACTACGCCACATGCGTCAAGATCTCCACTGATGCTTCCATCAAGG
AGATGATTCCTCCGGGTTGCCTTGTCATGCTCACACCTCTCATTGTTGGTTTCTTCTTTGGTGTTGAGACTCTCTCTGGTGTTCTC
GCCGGCTCTCTTGTTTCCGGTGTCCAGATTGCTATCTCTGCGTCTAACACTGGTGGTGCTTGGGACAACGCCAAGAAATACATCGA
GGCTGGTGTGTCAGAGCACGCAAAGAGTCTTGGACCAAAGGGTTCAGAGCCACACAAGGCAGCTGTGATTGGAGACACTATTGGAG
ACCCGTTGAAGGATACTTCAGGACCTTCGTTGAACATCCTGATCAAGCTCATGGCTGTTGAGTCTCTCGTCTTTGCTCCCTTCTTT
GCCACTCACGGTGGCATCCTTTTCAAGTACCTCTGAACTCAACCCTGAGTGAAGAAGAAAGATGATGATGAAGATGGTTACAATGC
CTCTTTTTACCATTCTTGTTTTCATTTTGCGTAGGTGGTTTTAAAACATTTAGTTTGGACTCATTCCAAAGAACCAAACCAAAAGA
TGTTTCTCTCTCTTTTTGTGCTGTCTAGATTTTAGAAATCCACCAAGTACTTTGAGTTATGTTTTGGTCTTCTTCGAGACGAATGA
GGTTTAAGTATCAGTCTTTTGTCGGCATTGGATGATTGAAACTGTTCTCATGATGTTTTAATTCTTTCAGTAACATATCACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAR08913 pyrophosphate-energized vacuolar membrane proton pump [Eutrema salsugineum]37800.0
NP_173021 Pyrophosphate-energized vacuolar membrane proton pump 1 [Arabidopsis thaliana]37430.0
AAL57660 At1g15690/F7H2_3 [Arabidopsis thaliana]37390.0
AAL84953 At1g15690/F7H2_3 [Arabidopsis thaliana]37380.0
XP_002890120 vacuolar-type H+-pumping pyrophosphatase 1 [Arabidopsis lyrata subsp. lyrata]37380.0

Swiss-Prot top hits (Blast detail)Scoree value
P31414 Pyrophosphate-energized vacuolar membrane proton pump 137430.0
P21616 Pyrophosphate-energized vacuolar membrane proton pump34300.0
Q06572 Pyrophosphate-energized vacuolar membrane proton pump33910.0
Q72Q29 Pyrophosphate-energized proton pump18161e-201
Q8F641 Pyrophosphate-energized proton pump18161e-201

TrEMBL top hits (Blast detail)Scoree value
Q6T553 Pyrophosphate-energized vacuolar membrane proton pump37800.0
Q0WWI1 Putative uncharacterized protein At1g15690 (Fragment)37320.0
B9N710 Vacuolar H+-translocating inorganic pyrophosphatase35200.0
A9PFH8 Putative uncharacterized protein34940.0
Q6R4U3 PPase34890.0

Arabidopsis top hits (Blast detail)Scoree value
AT1G15690.1 AVP1; ATPase/ hydrogen-translocating pyrophosphatase37490.0
AT1G15690.2 AVP1; ATPase/ hydrogen-translocating pyrophosphatase30560.0
AT1G16780.1 vacuolar-type H+-translocating inorganic pyrophosphatase, putative11626e-127
AT1G78920.1 AVP2 (ARABIDOPSIS VACUOLAR H+-PYROPHOSPHATASE 2); hydrogen-translocating pyrophosphatase11617e-127
AT1G78920.2 AVP2 (ARABIDOPSIS VACUOLAR H+-PYROPHOSPHATASE 2); hydrogen-translocating pyrophosphatase11617e-127

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  5%
 
183  8%
 
208  21%
 
212  5%
 
196  16%
 
63  8%
 
116  16%
 
73  8%
 
92  5%
 
81  3%
 
102  5%

Unigene MembersMember information