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Information for unigene UN21618
| FASTA Sequence |
| Unigene ID: UN21618 | Length: 1186 |
SSR | SNP | GGAGATGCCAACAAAAGACTTGTAAGTTTTATAAATCACGTGATAGATAAGAAACGTAGCTCTCTTTTTTGGAACTAATAAGAAAC
ATAGCTAAACAATAGAATAATAACATAAATATAGGTCCAAACAAAGCATAAACATAACGTACCAACAGGCATACATATTTCATAGC
AATCTTTTGAACAGATGCATAATACTCATAATAATCCGGTCCATTGAGAGTTTTGAAACCTTAAATAGTACTCACACGTCTCTGTC
CCGTTTACATTCGGCTGGCATAACTGGGAACCTTGTACGGTCGGTACAGTAGTTGTAGATGGTCCATTTCATGCGAACCCATTTGA
GACGACGATATTGTTCGGCATCAAGGTCACGGAACTCATTCTGGTCCCACCACATGCGGCCTTGGGTAGCACAGTACTTGGCCTCC
ACAGAAGCTTGGCAGCCGTCGATGTGGAATCCTCTGTAGGAAGCTATGAAGGGTGCATTAGCCCAATTGGTTTTCTCTAGACCTCC
TCTGGTGGCCCAATCGTCAGCGTTCCAAAGGCTCGAGTATAGCTTCATCGGTTGGTTGAATGGGAAACGTACTCCTAGATCCTTTG
CGTTCTTGAACACACGGATTGGTATGTTGTCAACAAAGAATACAATTTGGTAGAGATTCCAGAGGATGGAGTAAGTATGATAAGCC
TTTGAAGGGTCGAACCAGAGATAAATGCGTTGCTCTCTGTTTCCCTTTCCTCCTGTGAACACATTCGTCTGCAATATTGCTGGCTG
GCCTGTCCTGTTCCCGAGAAACTCGAAGTCTATCTCGTCATGCTCGTTGTTAGTCGACGACAGATAAAATGCAGTGACGACCCCAG
CGGTATCACCAGCTGGCAGCTTTATGTGCATACTGAAATGTCCGAACAAATATGACCCTTTGGATTGAAACCCTGTCCCAGTGTAT
TTGTCGAGGATGAGTTGGAGTTCAGAACCGCCATTGAGTTGCTTCTGGTGGTCAAAAGCCCAAGTTGGGACGTAGTTTCGGCCGAA
TGGCACATCAATGGCCTTCCGTGGAGGAATCGCCATTACAGTAGAAGAGGCCATTAGAAACAGAGCTATGAGAGCCCATGGAGTTG
AAGAAACAGCCATGGCTGGTTTGAAGAGAGAGAGAGAGAGAGAGAGATGTTGATGGTGAATGATGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q6YDN9 RecName: Full=Xyloglucan endotransglucosylase/hydrolase; AltName: Full=BobXET16A; Flags: Precursor | 1606 | 2e-176 |
| XP_002883741 endo-xyloglucan transferase [Arabidopsis lyrata subsp. lyrata] | 1561 | 3e-171 |
| NP_178708 xyloglucan endotransglucosylase/hydrolase protein 4 [Arabidopsis thaliana] | 1559 | 5e-171 |
| ADE42490 xyloglucan endotransglucosylase/hydrolase 1 [Fragaria x ananassa] | 1316 | 8e-143 |
| ACD03216 xyloglucan endotransglucosylase/hydrolase 6 [Actinidia deliciosa] | 1310 | 4e-142 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6YDN9 Xyloglucan endotransglucosylase/hydrolase | 1606 | 8e-178 |
| Q39099 Xyloglucan endotransglucosylase/hydrolase protein 4 | 1559 | 2e-172 |
| Q9XIW1 Probable xyloglucan endotransglucosylase/hydrolase protein 5 | 1302 | 1e-142 |
| Q8LNZ5 Probable xyloglucan endotransglucosylase/hydrolase protein B | 1250 | 2e-136 |
| Q41638 Xyloglucan endotransglucosylase/hydrolase protein A | 1247 | 3e-136 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D5HRN0 Xyloglucan endotransglucosylase/hydrolase 1 | 1316 | 5e-143 |
| C0IRG5 Xyloglucan endotransglucosylase/hydrolase 6 | 1310 | 3e-142 |
| C7F8A5 Xyloglucan endotransglycosylase | 1306 | 8e-142 |
| C0SSE2 Xyloglucan endotransglucosylase/hydrolase | 1303 | 2e-141 |
| D2Y4N9 Xyloglucan endotransglycosylase | 1303 | 2e-141 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G06850.1 EXGT-A1 (ENDOXYLOGLUCAN TRANSFERASE); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 1560 | 2e-173 |
| AT5G13870.1 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1303 | 1e-143 |
| AT3G23730.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 765 | 2e-081 |
| AT4G13090.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 758 | 2e-080 |
| AT5G65730.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 754 | 4e-080 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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