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Information for unigene UN21651

FASTA Sequence
Unigene ID: UN21651Length: 1864  SNP
GGGCTGCTTAACTGCGCCGCGACTTATATATCTTTAATCCTCTCTAGCAGGGCTGTTGTAGTGACAGTTTCTATCGGAGAAGATGA
AGTTCAACGTCGCGAATCCGACTACTGGTTGCCAGAAGAAGCTTGAGATCGATGACGACCAGAAGCTCCGTGCTTTTTATGACAAG
AGGCTCTCTCAGGAAGTTAGCGGAGATGCTTTGGGCGAGGAATTCAAGGGGTACGTCTTCAAGATCATGGGAGGATGTGACAAACA
AGGTTTCCCAATGAAACAGGGAGTTCTCACCCCTGGTCGTGTCCGCCTTTTGCTTCACCGAGGTACTCCTTGCTTCAGAGGACATG
GAAGGAGGACTGGAGAGAGGAGAAGAAAGTCTGTCCGTGGTTGCATTGTCAGCCAAGACCTTTCTGTGCTTAACTTGGTCATTGTC
AAGAAGGGTGAGAAGGATCTTCCCGGGCTTACCGATACCGAGAAGCCAAGGATGAGGGGACCTAAGAGAGCTTCTAAGATCCGCAA
ACTGTTTAACCTCACTAAGGATGATGATGTGAGGAAGTACGTCAACACTTACCGCCGCAAATTCACTAACAAGAAAGGTAAGGAAG
TGAGCAAAGCCCCCAAGATCCAGAGGCTTGTGACTCCTTTGACACTTCAGAGGAAGAGAGCTAGAATTGCCGACAAGAAGAAGAGG
ATCGCTAAGGCTAACTCTGATGCAGCTGAGTACCAGAAGCTTCTTGCCTCGAGACTCAAGGAGCAGCGTGATCGCCGTAGTGAAAG
CTTGGCCAAGAAGAGATCTAGACTCTCATCTGCTGCCGCTAAGCCCATTGCTGCTTAAAGCCACCTTCATGATTAAGAATTGCTTC
TTTCCCTAGTTTGTTTCTCATCGCATTAAGTTTTCTCCAAAGACATGAAAACACCATTTTGAACTCTTTTCTTTGTGTTTCTGCTT
TGTGCCTTATATTATATCAAAGTTTTGAACTGAACTTGTTTGCTTTGTTTTCGTTTTAATGACTTGATGCTCTGTAGTTCCATGAA
ATCGTTAATAACCGAGCTCGAAAACTCAATCAAACACTCGTAATAAAAACCTCGAACAAAAAGGCCATTGCTGATACATGAGAAGT
AAGGATACAAAAGGAAACATCCAATCAGTTTCTACGAGTTACAGCACATGCCACTCTTTGTCGGAATCACCTGAGCAGGACCAGGA
ACAATATCAATCTTCTTACCAGCAAGCGACGCAAAATCACCACCATTCCCTTCTCCACCAGCAACAAGGTTCTTCTTGTTCACAAT
ATTGAAAATCTCAGTCAAAACAGTCGAGAAAGCCGTCTCCACGTTGACCGCGTTCAGAGCCGAAGTCTCCAAGAAGAAAAGACCTT
CCGCCTCCGCGAACTCTTTAGCATCCTCCGTCGAGATCGCCCGCTGATCCTCGAGATCAGACTTGTTCCCGACGAGTATTATCACA
ATGTTCTTGTCCGCGTGGCCTCTCAGCTCCTCTAGCCACCTTGGGATGTGATCGAACGTCTGACGCCGCGTCACGTCGTAAACAAG
CATCGCACCTACCGCTCCTCTGTAATACGCGCTCGTCACCGCTCTATACCGTTCTTGGCCGGCGGTGTCCCAGATCTGAGCCTTGA
CGCTCTTGTGGTCCATCACGAGCGTTCGAGTTTGGAACTCGACGCCGATGGTGGCTTTGGAGTCCAAGCTGAACTCGTTCCTCGCA
TAACGGGAGAGTATCTGCGATTTCCCGACTCCGGAGTCTCCGATCAGGACTAGCTTGAAGACGTAGTCAATCTTCTGCGACGGGTC
TCCGTATCCTCCGCTCGACATCTTCCACCGTCTTCTTCTCAGATAGCAAATGGTGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAZ66937 117M18_18 [Brassica rapa]12533e-135
XP_002863274 predicted protein [Arabidopsis lyrata subsp. lyrata]12212e-131
XP_002873453 EMB3010 [Arabidopsis lyrata subsp. lyrata]12174e-131
NP_196598 40S ribosomal protein S6-2 [Arabidopsis thaliana]12158e-131
NP_194898 40S ribosomal protein S6-1 [Arabidopsis thaliana]12141e-130

Swiss-Prot top hits (Blast detail)Scoree value
P51430 40S ribosomal protein S6-212153e-132
O48549 40S ribosomal protein S6-112144e-132
Q9M3V8 40S ribosomal protein S611751e-127
Q40191 Ras-related protein Rab11A9107e-097
Q40522 Ras-related protein Rab11D9035e-096

TrEMBL top hits (Blast detail)Scoree value
Q4AC02 117M18_1812532e-135
Q3HVK4 Ribosomal protein S6-like protein11879e-128
B9RJN4 40S ribosomal protein S6, putative11709e-126
Q2VCJ5 Putative uncharacterized protein11627e-125
A9P9Y9 Predicted protein11619e-125

Arabidopsis top hits (Blast detail)Scoree value
AT5G10360.1 EMB3010 (embryo defective 3010); structural constituent of ribosome12162e-133
AT4G31700.1 RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome12144e-133
AT5G65270.1 AtRABA4a (Arabidopsis Rab GTPase homolog A4a); GTP binding10002e-108
AT4G31700.2 RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome8901e-095
AT4G39990.1 RABA4B (RAB GTPASE HOMOLOG A4B); GTP binding8685e-093

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1213  48%
 
201  4%
 
65  19%
 
101  4%
 
113  11%
 
11  4%
 
92  7%
 
181  4%

Unigene MembersMember information