 |
Information for unigene UN21657
| FASTA Sequence |
| Unigene ID: UN21657 | Length: 1717 |
| SNP | CAGTTTTCACAATAGAAAATCACTACTCAAAGGGTTTTAATATGTAAGACACTGTTCTGACTTGAATACATAACAAGATCGAGTTG
TGTTATGACCTAGACCAGCTTCCTCTGTGGATGATGATAAGTTCATTGGACAACATCGTACAGAACTATAGCTTGTGCAAGATAAG
ACGAGCACCGAACTGCGGGTGAAGTGTGATGACTGTGTAAGGCGCATGAACATAGGAAGGAGATAGCTCAAAGGAGAATCTCTGTA
GAATCAAAGCCAAAGCCATCTTTGTCTCCAACAGAGCAAAACTCTGACCAATACAGATCCTTGGTCCCCACGCAAAGGGAAAGAAA
GACACTTTGCCGTTTGTTGCCTTTGAGACACCGTCTTTGAACCTCTCCGGCTTAAACTCCGCCGCGTCTTCCCCCCATAGCTGTGT
GTCACGATGGACTAGAAGAATAGGTAAACTGATCTGAGCGCCGCGTGGTAGTGTCAAGTCTCCTAGCTTCATCTCTTTTTGAATGG
CCCTGGTCAGCTGAGCTACTGGTGGGTATAGCCTAAGAACTTCATATAGTATCATCATCATAACTTTGAGCTGATTAAGGCCTTCT
ACATCAGGTTCTTTATCGCCAAAAACTTGCTTCACTTCTTCTCTTGCATGAGCCTGCCAGTCTTGGTGTTGGCTTAACAAAACCAT
TGTCCAGACAAGAAGTACTGAAGTTGTCTCTTGCCCGGCGAAATAGAACAACTTGCACTCCTCCATCACATCCTCAGTGCTCATCT
TATTTCCTTTAGCTTGTCCCAAATTAGATTCAAGAAGTATACCTAGCAAGTCATCGCTTGGTGCTAATTCACCAGCTTCTCTAGCC
CTTAACCTTTTGTTAACTATCCCTTTCAGTATAACTTGGATTTCTTTAGCTGCTGCTTTGATCCTTCTATTGCCCTTTGTTGGGAG
ATAAAGATATCCAGGGATGAAAGCTTTCAGAACAGCTAGTATGATGAGCTGTGCTAGTTCTTCTTGGAGCTCAAATATCCTCTGCC
CTTCTTTGTAGCTGCTACCAAAAGCAGTACGAGAGATCACATCTGCAGTCATACTCACAAGCCCTGGCCACACGTCCACTTCACAG
GACACCCCTTTCTCCGAGACTATCTTGTCCCACTTTCCAACAACCTCGCTGCAGCTCTGGTGGAACGCAGGTACCATGTTCTTGAT
CTTCTCAAGATGGAAAGCAGGGTTGATGATTCTTCTGTGTTTAGCCCATTTATCACCATCATAGTTAGCGAGTCCCTTGGCTATCA
CGTTACCTAAAGGGAAGGTATGTGGCTTCTGGAAATCATAAACTTTGTTGAACACTTCCTTGATTAGCTCAGGGTCCATTATAGTG
ATGGTTGGTATAGTTCCAAGCCATGTAAAATATGTCCTTCCGTGAGTCTTGAGCATTTCCAAGGGAAAAGGCACGACACGTGTTGA
GATATCATCACTTAGATTGATGGGTTTGGGTCTTGCCTCCATCGCCATGCTAAAAGTCCTCTTCAAGTCGCCGATGAGTGGCGTGT
AAGGACTACCGGAAAGACCTTGACTTCTCAGGTAACTCTCAAGCATCTTTGGTTTAAACCAAACCCACCTTAAAGTTCTCCACGTC
CACCACGACGCAACAACTATAGCTAAAGAAACTGTTACTAGAGCAACTGATATCTCCATTATTTTTTTTGGTCTCTCAGAGCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882888 CYP72A15 [Arabidopsis lyrata subsp. lyrata] | 2308 | 1e-257 |
| NP_188087 cytochrome P450, family 72, subfamily A, polypeptide 15 [Arabidopsis thaliana] | 2289 | 2e-255 |
| BAJ33634 unnamed protein product [Thellungiella halophila] | 2258 | 8e-252 |
| NP_188083 cytochrome P450, family 72, subfamily A, polypeptide 11 [Arabidopsis thaliana] | 2254 | 2e-251 |
| NP_188084 cytochrome P450, family 72, subfamily A, polypeptide 13 [Arabidopsis thaliana] | 2253 | 3e-251 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q05047 Secologanin synthase | 1388 | 2e-152 |
| P15129 Cytochrome P450 4B1 | 409 | 8e-039 |
| O08336 Probable bifunctional P-450/NADPH-P450 reductase 2 | 344 | 3e-031 |
| P79401 Cytochrome P450 3A29 | 327 | 3e-029 |
| P24463 Cytochrome P450 3A12 | 311 | 2e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LUC5 Cytochrome P450 | 2289 | 1e-255 |
| Q9LUC9 Cytochrome P450 | 2254 | 2e-251 |
| Q9LUC8 AT3g14660/MIE1_16 | 2253 | 2e-251 |
| Q9LUC6 AT3g14680/MIE1_18 | 2181 | 5e-243 |
| Q9LUD3 Cytochrome P450 | 1861 | 6e-206 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G14690.1 CYP72A15; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 2290 | 5e-258 |
| AT3G14650.1 CYP72A11; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 2255 | 6e-254 |
| AT3G14660.1 CYP72A13; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 2254 | 8e-254 |
| AT3G14640.1 CYP72A10; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 2184 | 1e-245 |
| AT3G14680.1 CYP72A14; electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding | 2182 | 2e-245 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
