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Information for unigene UN21746
| FASTA Sequence |
| Unigene ID: UN21746 | Length: 2287 |
| SNP | GAGCGATGCTTACGTTCGAATCTCTTTCTGAAACTGCTGAGTTCGCAAAGAAATGGGTGCCTTTTTGCAAGAAATTCAGCATTGAA
CCCAGGGCCCCTGAATTCTATTTTCAGCAGAAGATAGATTACTTGAAGGACAAGATCCAGCCTTCTTTTGTTAAAGAGCGACGAGC
TATGAAGAGAGAGTATGAAGAGTTTAAGGTGAGGATCAATGCACTTGTTGCTAAAGCACAGAAAGTCCCTGAAGAAGGCTGGACGA
TGCAGGATGGTACTCCCTGGCCTGGTAACAACACTAGAGATCATCCTGGAATGATCCAGGTGTTCTTAGGCCACAGTGGAGGTCTG
GATACCGATGGAAATGAACTGCCTAGACTCATCTATGTTTCTCGTGAAAAGCGGCCTGGATTCCAACATCACAAGAAGGCTGGAGC
TATGAATGCCTTGATCCGTGTTTCTGCTGTTCTTACCAATGGAGCATATCTTTTGAACGTGGATTGTGATCATTACTTCAACAACA
GCAAGGCTATCAAAGAAGCTATGTGTTTCTTGATGGACCCTGCTTATGGAAAGAAGTGCTGCTATGTCCAGTTCTCACAGCGTTTC
GATGGTATTGACTTGCACGATCGATATGCCAACAGGAATATTGTCTTCTTCGATATTAACTTGAAGGGTTTAGATGGTATCCAAGG
TCCAGTATATGTGGGTACTGGATGTTGTTTCAATAGGCAAGCTCTATATGGATATGATCCTGTTTTGACAGAGGAAGATTTACAAC
CAAATATCATTGTCAAGAGCTGCTGCGGCTCAAGGAAGAAAGGAAAGAACAGCAAGAAGTATAGCTATGATCAAAAAAGGAGAGGC
ATCAGCAGAAGTAACTCCAATGCTCCACTTTTCAACATGGATGACATCGATGAGGGTTTCGAAGGATATGACGATGATAGGTCTAT
TCTAATGTCCCATAAGAGTGTGGAGAAGCGTTTTGGTCAGTCGCCAGTATTTATTGCGGCCACCTTCATGGAACAAGGTGGCATTC
CACCAACAACCAATCCAGCTACTCTTCTCAAGGAGGCTATTCATGTTATAAGCTGTGGTTACGAGGACAAGAGTGAATGGGGAAAA
GAGATTGGTTGGATCTACGGTTCAGTGACAGAAGATATTCTTACTGGGTTCAAGATGCATGCCCGTGGTTGGATGTCTATCTACTG
CAATCCTCCACGACCTGCGTTCAAGGGATCTGCACCAATCAATCTTTCTGATCGTTTGAACCAAGTTCTTCGATGGGCATTGGGAT
CTATCGAGATTCTTTTGAGCAGACATTGCCCCATCTGGTATGGCTATACCGGAAGGTTGAGACTCTTGGAGAGGCTCGCTTACATC
AACACCATTGTCTACCCTATTACAGCTCTCCCTCTCATCGCCTATTGTATCCTTCCAGCTTTTTGCCTCATCACCGACAAGTTCAT
CATACCTGAGATAAGCAACTACGCGAGTATTTGGTTCATTCTACTCTTTATCTCTATTGCTGTGACTGGAATCCTGGAGCTGAGAT
GGAGTGGTGTGAGCATTGAAGACTGGTGGAGGAACGAGCAGTTCTGGGTCATCGGTGGCACATCTGCTCATCTTTTTGCAGTCTTC
CAAGGTCTACTCAAGGTACTTGCCGGTATCGACACTAACTTCACTGTCACATCCAAAGCCTCGGACGAAGATGGGGATTTCGCAGA
GCTTTACATCTTCAAATGGACAGCTCTTCTCATTCCACCAACCACTGTCCTAGTTGTGAACCTCATAGGCATTGTGGCTGGTGTCT
CTTATGCTGTGAACAGCGGGTACCAGTCATGGGGTCCGCTCTTTGGGAAGCTTTTCTTCGCCTTATGGGTCATTGCCCATCTCTAC
CCGTTCTTGAAAGGTCTACTGGGAAGACAGAACAGAACGCCAACCATCGTCATTGTCTGGTCTGTTCTTCTCGCCTCCATCTTTTC
GTTGCTTTGGGTCAGGATCAATCCATTCGTCTCTGTCACTCCACAGGCCAACCCCAATGCCGTCCCAGGAGGTGTCTTTTAGACCC
CTATTTATATTACATTTTGTGTGCATATTATGGTGAACCAGGCGGTTATGGTGACTCAGTGTCAAAAGATTAGTTTTGAAACTGTT
GGTGGCTGTGTCACTGTTGTGATGATCTTATTTATTTCGGTATGTTATAGTTTTTTCCAGTGGAGATGATGATGTGGAAACCAAAT
GATACATAATATAATTGTTATTCATCTTGTTATATGTATTTTTATTGCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACS68189 cellulose synthase 1.1 catalytic subunit [Brassica napus] | 3600 | 0.0 |
| ACS68190 cellulose synthase 1.2 catalytic subunit [Brassica napus] | 3590 | 0.0 |
| NP_194967 cellulose synthase A catalytic subunit 1 [UDP-forming] [Arabidopsis thaliana] | 3491 | 0.0 |
| XP_002867245 hypothetical protein ARALYDRAFT_491486 [Arabidopsis lyrata subsp. lyrata] | 3491 | 0.0 |
| AEK31219 cellulose synthase A [Eucalyptus camaldulensis] | 3321 | 0.0 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O48946 Cellulose synthase A catalytic subunit 1 [UDP-forming] | 3491 | 0.0 |
| A2Y0X2 Probable cellulose synthase A catalytic subunit 1 [UDP-forming] | 3219 | 0.0 |
| Q6AT26 Probable cellulose synthase A catalytic subunit 1 [UDP-forming] | 3219 | 0.0 |
| Q9SKJ5 Probable cellulose synthase A catalytic subunit 10 [UDP-forming] | 3197 | 0.0 |
| A2XN66 Probable cellulose synthase A catalytic subunit 2 [UDP-forming] | 2930 | 0.0 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9IKV7 Cellulose synthase | 3310 | 0.0 |
| Q2IB39 Cellulose synthase 5 | 3297 | 0.0 |
| B9RP67 Cellulose synthase A catalytic subunit 6 [UDP-forming], putative | 3289 | 0.0 |
| Q4PKB6 Cellulose synthase CesA1 (Fragment) | 3266 | 0.0 |
| Q6DUJ3 CesA1 | 3256 | 0.0 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G32410.1 CESA1 (CELLULOSE SYNTHASE 1); cellulose synthase/ transferase, transferring glycosyl groups | 3492 | 0.0 |
| AT2G25540.1 CESA10 (CELLULOSE SYNTHASE 10); cellulose synthase/ transferase, transferring glycosyl groups | 3197 | 0.0 |
| AT5G05170.1 CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1); cellulose synthase/ transferase, transferring glycosyl groups | 2917 | 0.0 |
| AT4G18780.1 IRX1 (IRREGULAR XYLEM 1); cellulose synthase/ transferase, transferring glycosyl groups | 2665 | 2e-301 |
| AT4G39350.1 CESA2 (CELLULOSE SYNTHASE A2); cellulose synthase/ transferase, transferring glycosyl groups | 2646 | 4e-299 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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