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Information for unigene UN21780

FASTA Sequence
Unigene ID: UN21780Length: 825  SNP
GAGAGAAAAAAGGTTGCCTTCTGGTAATAGAATCAGTCTATACTTTAAAGTTGCAGCTCACTCACTTAGGCTTTGGACCAAACTTT
AAAAGTTAACAACACATTGAGACGACTGAGATTTCAACTACAGGTACCAAAAACAGATATCACCTTCTCTGTAATAAGAAGCTTGT
AGTGAAGATTTTGTCAAGCCTTTTGAGTGATGGATCCAAGGATCAAATCACGGATCTCCTCGCTGTTGGCTCTGTCAAGAGCAGTT
CTTCCATCAGCGTCCTTGACAGTGTAGTTAGCACCGGCTCTGAGGAGCTCCTCGATCTTAGGCTTGTCTCCTTCTGATGCTGCTAA
CATCAAAAGGATATCTACAGGATGAATGTTTTGGTTGAGAAGAGCCTCCATCTTATCGTAGGTTCCTTCCACCGCAAGCATCCCCA
TATAGTTGAAATACTGCTCGACATCGTCTCTGTCGAAATCATCCCGTGACTGGCTGCCATAGATTCCAGCATTCTCAGCATCGACA
CCGTTCTTTCCGAACTTGAACCAGCAAGTGGCTCTAGACCCATTGGAGGGTCCGAGTCCGATACTACTGAGCTTCACAACCCGAGT
TCCAAGAAACCGAGAGGAGAGTCTTACTGAGGAAGGAGAAGAACTGTTGATAGTTTTGGTTGTAGAGAAGAAGAAGCTCGTAGAAG
GAGCTCTGCATGATGAAATGGAAGCCATGGCTGCCTCAATGATTCTTCTGAGATTTTAGTTCCCGACAGGTAAGAAAGAATGTAGT
AGAGAGGGGACGGATAGGAGTACCGATAGAGCGGCAGCGACGGCTTTATGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAG50930 unknown protein [Arabidopsis thaliana]6661e-067
NP_564580 Ankyrin repeat family protein [Arabidopsis thaliana]6623e-067
XP_002864707 hypothetical protein ARALYDRAFT_919322 [Arabidopsis lyrata subsp. lyrata]6516e-066
XP_002319824 predicted protein [Populus trichocarpa]5961e-059
CAN65357 hypothetical protein VITISV_041274 [Vitis vinifera]5907e-059

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C6J0 Putative uncharacterized protein F8A12.126667e-068
Q8VY88 Putative uncharacterized protein6622e-067
B9I7N0 Predicted protein5969e-060
A5B8I4 Putative uncharacterized protein5905e-059
B9SAH7 Putative uncharacterized protein5905e-059

Arabidopsis top hits (Blast detail)Scoree value
AT1G50900.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin (InterPro:IPR002110); Has 30 Blast hits to 30 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).6631e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
105  15%
 
129  26%
 
99  26%
 
114  12%
 
83  9%
 
151  3%
 
192  6%
 
71  3%

Unigene MembersMember information