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Information for unigene UN21810

FASTA Sequence
Unigene ID: UN21810Length: 691  SNP
GGGTCCTCGTCGTGGTCGTAGTCTCTCTAACTCTCTCTTAAGATTCAAAAAGGACTTTTGCTTATCTTCCAAAATTCACCATGTCT
GGGGAAGAAGCTGCTCCTGCTGTTGTTGTTCCTCCGGCTGCTGAGCCAGCTGCAATTCCAGAGGACATGGATCTGTTGACTGCATT
GGAGCTGACTCTAAGGAAAGCCCGTGCTCACGGCGGTGTGACCCGTGGTCTCCATGAAAGCGCCAAGCTTATCGAGAAGCGTGTTG
CTCAGCTCTGTGTCTTGGCTGAAGACTGCAACCAGCCTGATTACGTCAAGCTTGTCAAAGCTCTATGCGCTGATCACAACATCAAC
TTGCTTACTGTTCCAAGTGCTAAAACCCTCGGTGAATGGGCTGGTCTTTGCAAGATCGATTCAGAGGGCAATGCAAGGAAGGTTGT
TGGATGCTCGTGCCTTGTAGTCAAGGATTACGGTGAGGAGACAACTGCACTCAACATTGTCAAGAAGCATATTGAATCTAACTAAA
ATCAGCAAAGTCAGATTTCAGATGCTATTTCCTCTTGTTTTTTTTGTTTTTTTAATTCTTGTTTAGTGGACGTGTCTTGACTTGAG
ATATGTTTGGGACAACTTTTTGATGTTATCTTAGCTCATATTTAAAACTCGACCAATTCACTCGTAAGAAGTTTTTTTGTTCTGCT
CCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173045 40S ribosomal protein S12-1 [Arabidopsis thaliana]6561e-066
NP_180766 40S ribosomal protein S12-2 [Arabidopsis thaliana]6497e-066
XP_002887897 predicted protein [Arabidopsis lyrata subsp. lyrata]6192e-062
XP_002890138 40S ribosomal protein S12 [Arabidopsis lyrata subsp. lyrata]5888e-059
XP_002881214 40S ribosomal protein S12 [Arabidopsis lyrata subsp. lyrata]5807e-058

Swiss-Prot top hits (Blast detail)Scoree value
Q9S9P1 40S ribosomal protein S12-16565e-068
Q9SKZ3 40S ribosomal protein S12-26493e-067
Q9XHS0 40S ribosomal protein S125132e-051
Q76I81 40S ribosomal protein S123716e-035
P25398 40S ribosomal protein S123716e-035

TrEMBL top hits (Blast detail)Scoree value
A9P9K3 40S ribosomal protein S125742e-057
B9GT02 40S ribosomal protein S125672e-056
A9PJY6 40S ribosomal protein S125591e-055
A9PDC2 40S ribosomal protein S125572e-055
B9S6H9 40S ribosomal protein S125536e-055

Arabidopsis top hits (Blast detail)Scoree value
AT1G15930.2 40S ribosomal protein S12 (RPS12A)6574e-069
AT1G15930.1 40S ribosomal protein S12 (RPS12A)6574e-069
AT2G32060.1 40S ribosomal protein S12 (RPS12C)6502e-068
AT2G32060.3 40S ribosomal protein S12 (RPS12C)6502e-068
AT2G32060.2 40S ribosomal protein S12 (RPS12C)6502e-068

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  20%
 
124  20%
 
96  30%
 
111  5%
 
63  15%
 
102  10%

Unigene MembersMember information