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Information for unigene UN21811

FASTA Sequence
Unigene ID: UN21811Length: 2217 SSR 
GGGTACAAGAGACTTTCTCTCTCTCTCTCTCTCTCTCTAGAAAGAAAGAAAGAAGTCATCTATCTATCTATGTGATCCATTCCAAC
TGGGAGAGACAGAAAAAAAAATCAGAAAATCTCCTAGATCGTCGTCGTCGTTGAATCGTCAAACCCTGACCAGATATGGGTGGTGG
AGTGAGAGAAGAGTAGAAGAACGAGCGGATTATTAGGAGTCTTCTCAAACTTCCACACAACAAGAGGTGTATCAACTGTAACAGCC
TCGGACCACAATATGTTTGCACTTCTTTCTGGACTTTTGTTTGTACCAACTGCAGTGGAATACACCGTGAGTTTACTCATCGTGTT
AAGTCCATATCAATGGCTAAATTCACTTCCCAAGAAGTCTCTGCTCTAAAAGAAGGTGGCAATCAGCATGCTAAGGATATTTATTT
TAAAGGACTGGATCAACAGATGCAGTCAGTATCTGACGGAAGTAATGTCGAGCGATTAAGAGACTTCATTAGACAGGTGTATGTTA
ACAAAAGGTATACGAATGAGAAGAATGACGACAAGCCTCCAAGAGGACCGATGGGAGATAGTGAGACACGAAGTTCTAGCGGGTCT
CGAAGTCCACCATATGATGATGTGTATGACCGTCGTTACAGCGGCAGATCAAGTCCTGCTGGTCCAGGGTTCGACCAAGCTACCAG
AAAAAGCCCTTCTCGTCCTGAGGTCATAAATGATTGGCGCAGAGAGGATAGGTTTGGTGGTGGGAAAAAAACAGAAGAGGAGTCCC
ATTCACCACCTGAGCAAGTAAAAGACTCGGCTTCAGCTAGCCCCCCTCCTGTAGCTCGACCCGTTAGGGAAATTTTGGGTGACAGT
TTTATTCCTCTTCGCGTGGTAGAGCCTCCGAAACCCCAAGTCAACCAAAATAACGATGCTTCAGCAAATGCAAAGCCTGCTGCATT
ATCGACCTCGACAAATGAGAATCCACCAGAAGTGAAGCTGGAGACTGCTATAAGCTTGATAGATTGATGCTGATCCCGAACCTCCA
GCCCCATCTGTTGCAATACAAGCCACACCACAGCCTGATAGTGCAAGTAATGATAACTGGGCATCTTTCGGTGCTGCGCCCAGTGC
ACTGAGTTCAAATGCATCTCAGTCACCAGTACCACCCAGTGGAAACACAGTGGATTCACTTCTCTCAGTTGGCAGCGCCTTCGTCC
GTGCCAGTTCAGATGTCTAGTGGACACGTGCATCTTGGTCATTTCTCATCACAAATCTTTGCACAACCTCCAAATGGGCATTCAAG
GGAACAGCCATGGAACACGGGACTTCCATCTAATGTACAAAGGTCAATGAGTGCACCGTCGTTTCAACCTCTTCAAGGAGTTCCTC
CTGGTGGCCTGCAGTCTTCTGAAATCAAACCTCCCGGAAGAACAGAATTACCTGCGGATTTATTCACTGTAACCTACCCATCATAC
TACGCAGCAGCGCCTGGGTGGCATGCTGGTCCACCACATGGTATGCATTATGGCATGCAGCAGTATAATAACACAGTGCAGCCTTT
CCAGAATGTTCCACAGCAAGGGAAGTCAGTGAACCCTTTTGACTTCACCTCTGAGCCACCATCACAGACACAACCAGAAACCATGT
TCCCTTCCATGGCGCCTCTACAAAGTGCATTACCTCCTTCAGGCATGATGCCTTCTCAAGGAGTACACAATCATTTCAGTATACCC
TCTCAAGTCTCAGGCCATCCATCTGCAATGCCACCAAGGTTTATATCTCCTCAAACGCCAGGAAACATGCCATCAAGCAATGTAAG
CCCAATTGGGAACATGGGCGCTCCATATGAGACGCAACAAACATATCAGAATTTCGGAAGCCCATATGCCTCTGCAGTTCCTTCGA
ACTCACCACCTTCTTTCTCTTCTGGAGGAAACCCGTTTGGGTAAGAATAGCAAGAACATTAGCTCGAAATCTGTAATGCTTTTGAG
GGATGATTGATTGGGCTCTTGGAAGTTTGAGTTCTAAAATGTGTGCAACCATTTGTTAAAAAGAGTGGACGAAAAGTGTGAGGCAT
GAAAGTGGAGAAGAATTTGGGGTTTGTGTGGCTGTTAAATCATTTATTATAAGCATCATTTTGAAATGGCTCTATTATTATTATTA
TTATTATTATTGTTATTATCATTATCATTACATTATTTGGTTTTCTATATTATTTCATTTCCCTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193071 NSP (nuclear shuttle protein)-interacting GTPase [Arabidopsis thaliana]11243e-120
XP_002863138 hypothetical protein ARALYDRAFT_358984 [Arabidopsis lyrata subsp. lyrata]11111e-118
CAB40770 putative protein [Arabidopsis thaliana]9756e-103
XP_002324405 predicted protein [Populus trichocarpa]6111e-060
XP_002281316 PREDICTED: hypothetical protein [Vitis vinifera]6011e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q8RXE7 Probable ADP-ribosylation factor GTPase-activating protein AGD144852e-047
Q2TA45 Arf-GAP domain and FG repeats-containing protein 12371e-018
P52594 Arf-GAP domain and FG repeats-containing protein 12371e-018
Q8K2K6 Arf-GAP domain and FG repeats-containing protein 12371e-018
Q4KLH5 Arf-GAP domain and FG repeats-containing protein 12371e-018

TrEMBL top hits (Blast detail)Scoree value
Q8W4K6 At4g1335011242e-120
Q9T0K6 Putative uncharacterized protein AT4g133509754e-103
B9ILJ3 Predicted protein6117e-061
B8ADW7 Putative uncharacterized protein5776e-057
Q6H8D7 Rev interacting-like protein-like5732e-056

Arabidopsis top hits (Blast detail)Scoree value
AT4G13350.1 NIG (NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE); GTP binding / GTPase11241e-122
AT4G13350.2 NIG (NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE); GTP binding / GTPase11241e-122
AT1G08680.3 ZIGA4 (ARF GAP-like zinc finger-containing protein ZiGA4); ARF GTPase activator/ DNA binding / zinc ion binding4887e-049
AT1G08680.1 ZIGA4 (ARF GAP-like zinc finger-containing protein ZiGA4); ARF GTPase activator/ DNA binding / zinc ion binding4851e-048
AT1G08680.2 ZIGA4 (ARF GAP-like zinc finger-containing protein ZiGA4); ARF GTPase activator/ DNA binding / zinc ion binding4851e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  15%
 
65  38%
 
112  15%
 
81  8%
 
91  8%
 
102  15%

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