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Information for unigene UN21853
| FASTA Sequence |
| Unigene ID: UN21853 | Length: 1323 |
| SNP | ATAATCCAAATCAATTGTAACTTCAAAACACTGCAATATCTAATATTCTTGCACCTTATCCCAGAAACAGAGTTATAATCAGTAAG
CTCTAAAAGGAAAAAGGCAGGTTTTTCTTATGCGGCAACAAGATCTGGTGTCTCAGCCTCAACAGATAGCAAAGTGGTGTGGACTT
TGTCGACCCAACTGTCCAATTGATCCCTCAAAGACTTGATCTGTGGAATCCCCAACACTCTCGGTTGGGCCCATGAGATGTAAACT
GTTCCATTCACTTGATCTATAGTCCCCTCAATCAAATGCACAGAAAGACTCTTCATGAAAAGGTGCTCAACGTCTTCAATGGAAAG
TTTAGTACGCTCAGCAATGACAGTCAAAGGAATAGTCCTATCTTCAGCAGGTCGGCTGAAGATGATCTCGATAAGGCAAAGAATGT
TGATTCTTCTCTAATAGTTTCTTCTCATTCTCAACCAGTGCTGGTTGGGCAATCAAGGATGCATGGTGCACACGACACAGTTCTTG
ATACTGAACTAAATCACCATGGTTGAACGCCTGGAGAATGTGGTAAAGCCATTCCACATTTGTTCCAAGGAGACTTTTCAAAATGG
GATGAGCCAAGAGTTCCCCAAAGTTGTAGATGTTTTCTCCAAGTAGAGCTGAAAGTGACAAATCGAAAGCCAAATCCAGCTTAAAG
GATTCAGAGAGTGCCTCCACAGAAGTATACGCAAGATAAAGCAGAGCACTTTTGTAGAAATCAGAGAACTCCTGACGGAACTTGTG
GTACTGAGAAGACACCCAGTAGAAGTTCGCGAACACCGAAGGGTCAATGTCAGTCATGCTATCAAGAGAGGTCTTGGCATCGTCCA
AGACCTTCTTGCACTCCTTCTGATCACCTTGCTCAAGCTTGAACAAAGCCTTTTGCGTCTCGATGTAAACGATAGGTTCAGTGATG
CGAGGCTCCTTAGTGGCTTTAAGCTTCTCAATCACTCCTTCGAGATAGCTAACCGCAGCTTCTTTCTCAGCGTACTGACGGGAGAC
CACCACAGCGAAATGCGCGAGCTTGAGGAGGTTGATCTTCGTCTCGAAGTCGGTGATGAAGTTGTGGTAGAACTGTACCAAAGCAT
CTCCAGCCTGAAAAACGGAGAGAGCGATGAACTGCTCGAGCTTGAGGGTGAGCTGATGCCATAGCTTTTTCTGATACAGATCTGCG
AGGGAATCGTACCATTCATTGAGCTCTGGATGCGAAGTTTTCAGCGATTCCAAGTATTGAAGAGCAGCCATGGCGGAAATAGGTTT
TGCTTCGCAGAAGTAGAGACGAAAGATGATGAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB09205 26S proteasome subunit-like protein [Arabidopsis thaliana] | 1364 | 3e-148 |
| NP_199375 26S proteasome regulatory subunit N9 [Arabidopsis thaliana] | 1364 | 3e-148 |
| NP_974889 26S proteasome regulatory subunit N9 [Arabidopsis thaliana] | 1364 | 3e-148 |
| XP_002865235 hypothetical protein ARALYDRAFT_494422 [Arabidopsis lyrata subsp. lyrata] | 1364 | 3e-148 |
| XP_002867964 hypothetical protein ARALYDRAFT_914767 [Arabidopsis lyrata subsp. lyrata] | 1308 | 8e-142 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54NQ0 26S proteasome non-ATPase regulatory subunit 13 | 504 | 6e-050 |
| B0BN93 26S proteasome non-ATPase regulatory subunit 13 | 444 | 5e-043 |
| Q9UNM6 26S proteasome non-ATPase regulatory subunit 13 | 438 | 3e-042 |
| Q5E964 26S proteasome non-ATPase regulatory subunit 13 | 436 | 4e-042 |
| Q9WVJ2 26S proteasome non-ATPase regulatory subunit 13 | 434 | 8e-042 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3E8G4 Putative uncharacterized protein At5g45620.2 | 1364 | 2e-148 |
| Q8RWF0 26S proteasome subunit RPN9a | 1364 | 2e-148 |
| Q9FK79 26S proteasome subunit-like protein | 1364 | 2e-148 |
| Q8GYA6 26S proteasome subunit RPN9b | 1304 | 2e-141 |
| B9RZ27 26S proteasome subunit, putative | 1233 | 3e-133 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G45620.2 26S proteasome regulatory subunit, putative (RPN9) | 1364 | 1e-150 |
| AT5G45620.1 26S proteasome regulatory subunit, putative (RPN9) | 1364 | 1e-150 |
| AT4G19006.1 26S proteasome regulatory subunit, putative (RPN9) | 1304 | 9e-144 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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