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Information for unigene UN21859
FASTA Sequence |
Unigene ID: UN21859 | Length: 1100 |
| SNP | GGCTCACACGCTCTGTCTTCTCCCTTCTGGTTGGATTAGATATTTAGGGCTTTGAAGCCGAACGCTTGAAGCTACTAAAATCGAGC
AAAAAAAAAATGGAGATAGCGGAGCGTAGGGAGGAGGAGATCAGAGAATCGGGAAACATGGAGAACATAAAGTCAGACTCTTTTTC
CGATGAACGCTACTCTCGCGACCTCAAAGCTGGTCTTCATCCTCTTCGGTACAAGTTTGCGATTTGGTACACACGTCGGACACCAG
GGGTGAGGAGCCAGACATCTTATGAGGATAACATTAAGAAGATTGTTGATTTCAGCACGGTGGAAGGGTTTTGGGCATGCTACTGT
CACCTAGCTCGTTCTTCTCTCTTGCCTAGTCCTACTGATCTTCATTTCTTCAAGGATGGCATTCGCCCCTTGTGGGAGGATTCTGC
TAACTGCAATGGAGGAAAGTGGATCATACGTTTCTCCAAAGTTGTATCCGCTCGCTTCTGGGAGGATCTGCTTCTTGCCTTGGTAG
GGGACCAGCTTGATGATGCTGACAATATCTGTGGGGCAGTACTGAGCGTCCGCTTCAACGAGGACATTATTAGTGTATGGAATCGC
AATGCTTCTGATCATCAGGCAGTGATGGGTTTGAGAGACTCAATCAAGCGGCATTTGAAGCTGCCTCATGCTTATGTTATGGAATA
CAAACCCCACGATGCTTCTCTCCGCGACAACTCCTCCTACAGGAACACATGGATGAGAGGATAGAAGTAGACCATTGTGTAACGTG
ATGTGGAGAAAGATTTGGGTAGCTCTCTTGCAACCTTGGAAGAAGATGTATGGACTGAAACCCTGTTTCCTGTAGCACACTTTATC
AACATTATATTTTTCCAATTACACTTTCAGACACTTGTGAATGGAGACACACATTGTTTATGTGCATTGTCTTTAGTACCCTCACT
TTACTACATTTATTTTTTAGTTCTAGTTCTCTTCCAACAAGTGCAATCTGTCAAATTTGTAAAATAATAATTTATCTCTTAACCTT
TCTTTTCTCTCTCCCACTTTCGAAATCAGATTTTGAAAGTAAATCCATTTCCAATTTATCTTTAGTAC
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GenBank top hits (Blast detail) | Score | e value |
XP_002873873 cap-binding protein nCBP [Arabidopsis lyrata subsp. lyrata] | 1065 | 9e-114 |
AAC17220 novel cap-binding protein nCBP [Arabidopsis thaliana] | 1063 | 2e-113 |
NP_197312 translation initiation factor eIF-4E [Arabidopsis thaliana] | 1055 | 1e-112 |
XP_002525418 eukaryotic translation initiation factor 4e type, putative [Ricinus communis] | 959 | 2e-101 |
XP_002281697 PREDICTED: hypothetical protein [Vitis vinifera] | 948 | 3e-100 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9FK59 Eukaryotic translation initiation factor 4E type 3 | 1055 | 6e-114 |
O60573 Eukaryotic translation initiation factor 4E type 2 | 490 | 2e-048 |
Q8BMB3 Eukaryotic translation initiation factor 4E type 2 | 488 | 3e-048 |
Q22888 Eukaryotic translation initiation factor 4E-4 | 434 | 6e-042 |
Q9DFS6 Eukaryotic translation initiation factor 4E-1A | 317 | 2e-028 |
TrEMBL top hits (Blast detail) | Score | e value |
B9SHE9 Eukaryotic translation initiation factor 4e type, putative | 959 | 1e-101 |
D3TI43 Cap-binding protein-like protein | 936 | 6e-099 |
C6SW38 Putative uncharacterized protein | 935 | 7e-099 |
C6T2J3 Putative uncharacterized protein | 931 | 2e-098 |
B9I5X1 Predicted protein | 924 | 1e-097 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G18110.1 NCBP (NOVEL CAP-BINDING PROTEIN); RNA binding / translation initiation factor | 1056 | 4e-115 |
AT4G18040.1 EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E); RNA binding / RNA cap binding / protein binding / translation initiation factor | 301 | 1e-027 |
AT1G29550.1 eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative | 259 | 1e-022 |
AT1G29590.1 eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative | 253 | 5e-022 |
AT5G35620.1 LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1); RNA 7-methylguanosine cap binding / RNA binding / translation initiation factor | 253 | 5e-022 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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