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Information for unigene UN21998

FASTA Sequence
Unigene ID: UN21998Length: 1560 SSR 
GGGAATCGTCTCGTCGTCCTCACAGTTTCATCGGCCGTTGACTATCTCCGGCGACAAGAGAGAGATCAGAATCTTATTGATTTCTA
ATTTCTTTCTCGTTCAAGCTTATTAAAAAATGGCTGAAGCTGATGATATTCAACCCATCGTCTGTGACAATGGTACCGGTATGGTC
AAGGCTGGATTTGCTGGTGATGATGCACCCAGGGCTGTTTTCCCTAGTGTTGTTGGTAGGCCAAGGCATCACGGTGTCATGGTTGG
GATGAACCAGAAGGATGCTTACGTTGGTGAGAAGCCCAGTCCAAGAGAGGTATTCTCACCTTGAAGTACCCTATCGAGCATGGTGT
TGTGAGCAACTGGGATGACATGGAGAAGATCTGGCATCACACTTTCTACAATGAGCTCCGTATTGCTCCTGAGGAGCACCCCGTTC
TTCTTACCGAGGCTCCTCTTAACCCAAAGGCCAACAGAGAGAAGATGACTCAGATCATGTTCGAGACCTTTAACTCTCCGGCTATG
TATGTCGCTATCCAAGCTGTTCTCTCCCTGTACGCCAGTGGTCGTACTACCGGTATTGTGCTGGATTCTGGTGATGGTGTGTCTCA
CACTGTGCCGATCTACGAGGGTTTCTCTCTTCCACATGCCATCCTCCGTCTTGACCTTGCTGGTCGTGACCTTACTGATTACCTCA
TGAAGATTCTTACCGAGAGAGGTTACATGTTCACCACAACAGCAGAGCGGGAAATTGTAAGAGACATCAAGGAGAAGCTTTCCTTT
GTCGCTGTGGACTACGAGCAGGAGATGGAGACTTCCAAATCCAGCTCCTCCATCGAGAAGAACTACGAGTTACCCGACGGACAAGT
GATCACCATCGGTGCCGAGAGATTCAGGTGCCCGGAGGTTCTGTTCCAGCCTTCGTTCGTGGGAATGGAAGCTGCTGGAATCCACG
AGACGACCTACAACTCGATCATGAAGTGTGACGTGGATATCAGGAAGGACTTGTACGGTAACATTGTGCTCAGTGGTGGAACCACT
ATGTTCTCGGGGATTGCAGACCGTATGAGCAAAGAGATCACGGCGCTCGCACCAAGCAGCATGAAGATTAAGGTCGTTGCACCTCC
CGAGAGGAAGTACAGTGTCTGGATCGGTGGTTCCATTCTTGCTTCCCTCAGCACATTCCAGCAGATGTGGATCTCCAAGGCTGAGT
ATGATGAGGCAGGTCCAGGGATTGTTCACAGAAAATGCTTTTAAGCTCTCTCTCTCTCTCAGTGAGAAGGCTACACAAGCTGGGTA
TTATGAATGGGATCAAAGTTTCTTCTTTTTTTTGTTTGTTTCTATTTGCTTCTCCATTTGTTTGTTTCATTTGCTTTCTTTTCGTT
ATCGTTTCTATGCACTTGTGTGTGACAAAACTCTCTGGGTTTTACTTTACGTCTGCGTTTCAAGAAACAGCTTTGGATTTGCGTTT
TAGTCCACATTGTTTTGTAGCTCGAGTGCCTCTATTTTTCTGTATTTCTTTCAAAAAAACTGGGAAGAAAGGAGCTTGATAATACT
CTTTGCATTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175350 actin 8 [Arabidopsis thaliana]16466e-181
NP_188508 actin 2 [Arabidopsis thaliana]16466e-181
AAM64898 actin 8 [Arabidopsis thaliana]16431e-180
AAC49523 actin 8 [Arabidopsis thaliana]16403e-180
BAH20120 AT3G18780 [Arabidopsis thaliana]16403e-180

Swiss-Prot top hits (Blast detail)Scoree value
Q96292 Actin-216463e-182
Q96293 Actin-816463e-182
A2XLF2 Actin-115891e-175
Q10DV7 Actin-115891e-175
P30164 Actin-115801e-174

TrEMBL top hits (Blast detail)Scoree value
Q0WL95 AT3G18780 protein16464e-181
Q8LB94 Actin 816431e-180
B9DHA3 AT3G18780 protein16402e-180
Q9ZTP9 Actin16331e-179
A2WXB0 Putative uncharacterized protein16017e-176

Arabidopsis top hits (Blast detail)Scoree value
AT1G49240.1 ACT8 (ACTIN 8); copper ion binding / structural constituent of cytoskeleton16472e-183
AT3G18780.2 ACT2 (ACTIN 2); structural constituent of cytoskeleton16472e-183
AT5G09810.1 ACT7 (ACTIN 7); structural constituent of cytoskeleton15782e-175
AT3G12110.1 ACT11 (actin-11); structural constituent of cytoskeleton15745e-175
AT2G37620.1 ACT1 (ACTIN 1); structural constituent of cytoskeleton15621e-173

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  44%
 
71  11%
 
211  11%
 
201  11%
 
62  22%

Unigene MembersMember information