RadishBase

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Information for unigene UN22081

FASTA Sequence

Unigene ID: UN22081	Length: 1542		SNP
GGATGAGGCTTTGCTCTCGGACTGGAAGGAGAAGCTGGACCGTGATACAGAGCTTCTGAGGGTTCAGGCTAATATAAGCAGCATCC TAGCTGTCCTCACCAAAAACCGGCTGGAGTGCCCTGACCTTGGAACCATGTGCATCAAAGATCAAACCCTTCCTCCTGAAAGTGTT GAGAAAGTGGTTGGCTGGGCTTTAAGCCACCATCTTATGAACTGCGCAGAACCCACAGTCAAAGACAACAAACTTGTTATCTCAGC AGAAAGCATTACATATGGCCTGCAGATGTTACATGGGGTTCAGGACGAAAACAAGAGTCTGAAGAAATCCCTCAAGGATGTTGTGA CAGAGAACGAGTTTGAGAAAAAACTCTTATCAGATGTCATCCCCCCTAGCGATATAGGTGTGTCCTTTGATGATATTGGGGCTCTG GAGAATGTGAAAGACACACTTAAGGAGTTGGTGATGCTTCCTCTTCAAAGACCTGAGTTGTTTGACAAAGGCCAGCTAACTAAGCC TACGAAAGGTATTCTGTTGTTTGGACCACCTGGTACCGGAAAGACAATGCTGGCAAAGGCAGTAGCAACTGAAGCTGGCGCAAACT TCATCAATATCTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAGGGAGAGAAGTATGTTAAAGCTGTCTTCTCTTTAGCAAGC AAGATCGCTCCAAGTGTCATTTTTGTTGATGAGGTTGATAGCATGTTGGGAAGACGTGAGAATCCAGGGGAACATGAAGCTATGCG TAAGATGAAGAACGAGTTCATGGTAAACTGGGACGGTTTAAGAACAAAGGATAGAGAACGAGTTCTTGTACTCGCTGCTACCAACA GACCATTTGACCTCGACGAAGCAGTTATTAGACGGCTTCCCCGGAGGTTGATGGTGAATCTTCCAGATGCGACCAATAGATCAAAG ATCTTGAGCGTTATTCTTTCTAAAGAAGAAATAGCACCTGATGTTGATTTAGAAGCGATTGCTAATATGACAGATGGCTACTCAGG AAGTGACTTAAAGAATCTTTGTGTGACTGCTGCTCATCTTCCAATTCGAGAAATACTGGAGAAAGAAAAGAAGGAAAAAACTGCAG CTGAGGCTGAGAACCGTCCAACGCCTCCTTTGTATAGCTGCACAGACATACGTCCACTGACAATGGCAGATTTCAAGGCTGCACAT GAACAGGTCTGTGCGAGTGTGTCTACGGACTCATCGAACATGAACGAGCTTCAGCAGTGGAACGAGCTGTACGGAGAAGGTGGGTC AAGGAAGAAGACGTCCTTGAGCTACTTTATGTAGAAGAGACGAGAGAGAGAAGGGGAGAGATTTGTTGGTTTTTATCTGATTTTGG TCCTTTTTCTTTAATTTATAAAATATTTATGTACAGAAGAGAGAAAAGAGTGTTGTTCGGTTTATTGTCTAATTCATTTTCTTTCT CAACATAAGAAGTTAAAAACATTCGCTGTATAAACTAATACATGCGTATGTATATACAGGTTCGGATCTTTTAAGGATAC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002872834 AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]	2139	4e-238
NP_567238 AAA-type ATPase family protein [Arabidopsis thaliana]	2125	2e-236
AAM13995 unknown protein [Arabidopsis thaliana]	2125	2e-236
BAF02143 hypothetical protein [Arabidopsis thaliana]	2125	2e-236
XP_002892133 AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]	2027	4e-225

Swiss-Prot top hits (Blast detail)	Score	e value
Q7ZZ25 ATPase family AAA domain-containing protein 1-A	617	5e-063
Q8NBU5 ATPase family AAA domain-containing protein 1	614	1e-062
Q9D5T0 ATPase family AAA domain-containing protein 1	614	1e-062
Q505J9 ATPase family AAA domain-containing protein 1	614	1e-062
Q503W7 ATPase family AAA domain-containing protein 1-B	611	3e-062

TrEMBL top hits (Blast detail)	Score	e value
Q0WL64 Putative uncharacterized protein At4g02470 (Fragment)	2125	1e-236
Q0WM93 Putative uncharacterized protein At4g02480	2125	1e-236
Q8RX24 Putative uncharacterized protein At4g02480	2125	1e-236
B3H4X5 Uncharacterized protein At1g02890.1	2009	3e-223
B9SAN5 ATP binding protein, putative	1908	2e-211

Arabidopsis top hits (Blast detail)	Score	e value
AT4G02480.1 AAA-type ATPase family protein	2126	5e-239
AT1G02890.1 AAA-type ATPase family protein	2010	1e-225
AT4G24860.1 AAA-type ATPase family protein	1453	5e-161
AT1G64110.2 AAA-type ATPase family protein	1046	9e-114
AT1G64110.1 AAA-type ATPase family protein	1046	9e-114

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


10	2			17%


20	1			8%


11	2			17%


8	2			17%


21	1			8%


9	2			17%


6	2			17%

Unigene Members	Member information