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Information for unigene UN22107

FASTA Sequence
Unigene ID: UN22107Length: 1542 SSRSNP
GCACCAGCAACAATCAGTTTGGCTGAAAGAGTAGCACTTTTCTCCATCTGGTCGTAGTCGATGAAGCCAGTGCTCTCGTCCAAGCG
GTAGGGCATTGTTTCAAAGAAGATAGACACAGCAGATATCTTCTTGGTGTCAGTCTGATAACCATGAGAAAGATGACCACCGTGAG
GAAGATCAAGTGCCATGATTCTCTCATGAGGCTTCAACAATGCAGTGTACACATGGAAGTTGGCAGGTGATCCAGACAAAGGTTGG
ACATTCACTCCCCACTTCTCAGGGTCTAACCGGAAAGCTTCTAGAGCACGCTTCTGGCACAAGGTTTCCGCCATGTCTATGTACTC
ATTTCCTCCATAGTATCTAGCACCAGGGTACCCTTCACTGTACTTGTTAGTCATCACAGAGCCAACAGCTTGCATCACCGAGACAG
ATGTGAAATTCTCAGATGGAATGAGTTCAAGCCCTTTCCACTGTCTAGCTTTCTCATGCTCAATGATGTCAGCAATCTCAGGATCA
ACTTCCTCCAAAGATGCGTTCAGCTGTTTTGGCCAAGTGACACGAGATCTCTCCTTGTCATCGACAGCTTCACTGGGCAAAGAAGA
CATGTAGCACGAGGATGATCTGATAAGAGGACGAATAGGTTTGTCAACTGAAGAAGAAAGTCTCCTAAGAGCCATTGCCATCGCCA
TTTTTGCTCTGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGATCTCTCGGTTACATTCTACAGAGTAAGATGGG
GTTGAGTTTCGCAAAGCTGTTTAGCAGGCTCTTTGCAAAGAAGGAGATGAGGATTCTGATGGTTGGTCTTGATGCTGCTGGTAAGA
CCACTATCTTGTACAAGCTCAAGCTCGGTGAGATTGTCACCACCATCCCCACTATTGGTTTCAATGTGGAAACTGTGGAGTACAAG
AACATCAGTTTCACTGTGTGGGATGTTGGGGGTCAGGACAAGATTCGTCCCTTGTGGAGGCACTACTTCCAGAACACTCAGGGTCT
GATCTTTGTCGTGGACAGCAACGACAGAGACAGAGTTGTTGAGGCTAGAGATGAACTGCACAGGATGCTCAATGAGGACGAGCTGC
GTGATGCTGTGCTGCTTGTGTTTGCCAACAAGCAAGATCTTCCAAATGCGATGAATGCAGCTGAAATCACAGATAAGCTTGGTCTT
CACTCCCTGCGTCAGCGTCACTGGTACATTCAGAGCACATGCGCCACTTCAGGTGAAGGACTGTACGAAGGTCTGGACTGGCTGTC
CAACAACATCGCTGGCAAGGCGTAATGAGGGTGAGTTGCAGTTGCATCGAGCTGATTGTGTCTTCTGTGATGCAAAGAAACGATTA
TAAATATTATCTGGACCTTTTTGCATATTGGGTATGTGAATGTTTTGATTGTGCAAGTAGATGTCTTGTCTTTAAAACTTACTAGA
AGAACCCATTTAAATAAGTTTTCGTGTATTTTGAATATGGATATGTTCCTTTGCAAGAAGCGTCTACGTTATTTTGTACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195506 glycine hydroxymethyltransferase [Arabidopsis thaliana]11466e-123
XP_002866922 hypothetical protein ARALYDRAFT_490821 [Arabidopsis lyrata subsp. lyrata]11466e-123
AAL06913 AT4g37930/F20D10_50 [Arabidopsis thaliana]11412e-122
BAJ33788 unnamed protein product [Thellungiella halophila]11351e-121
ACM45955 serine hydroxymethyltransferase 5 [Glycine max]10581e-112

Swiss-Prot top hits (Blast detail)Scoree value
Q9SZJ5 Serine hydroxymethyltransferase, mitochondrial11462e-124
P50433 Serine hydroxymethyltransferase, mitochondrial10414e-112
P34899 Serine hydroxymethyltransferase, mitochondrial10201e-109
P49357 Serine hydroxymethyltransferase 1, mitochondrial10172e-109
P49358 Serine hydroxymethyltransferase 2, mitochondrial9823e-105

TrEMBL top hits (Blast detail)Scoree value
C6ZJZ0 Serine hydroxymethyltransferase10587e-113
A9YWS0 Serine hydroxymethyltransferase10425e-111
B9SMK7 Serine hydroxymethyltransferase10362e-110
Q677H6 ADP-ribosylation factor (Fragment)9377e-099
B2Z3W8 Putative ADP-ribosylation factor9342e-098

Arabidopsis top hits (Blast detail)Scoree value
AT4G37930.1 SHM1 (SERINE TRANSHYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase/ poly(U) binding11462e-125
AT5G26780.1 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding9553e-103
AT5G26780.3 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding9553e-103
AT5G26780.2 SHM2 (SERINE HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine hydroxymethyltransferase/ pyridoxal phosphate binding9553e-103
AT1G70490.1 ARFA1D; GTP binding / phospholipase activator/ protein binding9392e-101

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
125  31%
 
63  19%
 
81  6%
 
105  31%
 
71  6%
 
111  6%

Unigene MembersMember information