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Information for unigene UN22140

FASTA Sequence
Unigene ID: UN22140Length: 837 SSRSNP
GGACTATGAAAGAGAAGATTTATTAGGATGATCATTACCTGTTATTGGTTTATACATATATAATAATCTCTCAAACAACACTGTGA
CATTTAAGTTGTAGGCAATTTTCAAAAGATTCAAATGATGTTTTATATACATTGTCTCTTATATTAATACAAATTGTTGACAGCCC
CAACTTCTCTCTTCACATCACACAGCATTTAGCTGGTCCCTTTGGATCTGCCCTAGCTTCCTCGGTACCTTCCGGGGGTTGAGCTA
ACTTGCGGTTATGTGAAGTCATCATTTCTTTTTTAAGTTTAACCAGAATGTCCTCCATTGTGTATTCTCGGCGCCAGTTAGCGAGC
ATAGGAAAGAGACTCGGTTCAACCACTCCAGTCTGAGGGTTAACGCAGGCCATGTTAATCCGGGTCTGGAACTTGACACTTGGTGG
ACTCTCTGGGTATTCCTTACCACAGAAGAGCTTGAGCTGGAAGATTTTCCCATCGTATGCAGTATTATGAGGGCCGAGAATAGTGC
CAGTCCAGGATTGCATATAGATATCATCAGCGTCGTCCATTCCATAGCTTACCGTACCATCTCCGATACCTTTCTCTCCTCTCTCT
AGCTCTTCCAACAACCTAAAGTTCCTTGGCACAACGACCTTGGCTTCCTCCGAGCTCATCGTAGACGGAAATCGAGATAAAGATGA
TAAGGAACGATTAGAGAGAGAGAGAGTGTGTGTGTATAGAGAGAAAAGATTGGAAGAGGAAGAAAAGTTTTTGGTCGTGTTTTTCA
GGTAGAGGGGGGGCTCCAATTATTATCCGGATCCACCATGCGCTTCCAAAAGTCTGATGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564191 ubiquitin-conjugating enzyme E2 variant 1A [Arabidopsis thaliana]8131e-084
XP_002893271 hypothetical protein ARALYDRAFT_889865 [Arabidopsis lyrata subsp. lyrata]8075e-084
AAM65883 E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana]7206e-074
NP_564994 ubiquitin-conjugating enzyme E2 variant 1B [Arabidopsis thaliana]7198e-074
XP_002887321 hypothetical protein ARALYDRAFT_476195 [Arabidopsis lyrata subsp. lyrata]7198e-074

Swiss-Prot top hits (Blast detail)Scoree value
Q93YP0 Ubiquitin-conjugating enzyme E2 variant 1A8134e-086
Q9CAB6 Ubiquitin-conjugating enzyme E2 variant 1B7193e-075
Q9SVD7 Ubiquitin-conjugating enzyme E2 variant 1D6172e-063
Q9SJ44 Ubiquitin-conjugating enzyme E2 variant 1C5842e-059
Q54D06 Probable ubiquitin-conjugating enzyme E2 variant4335e-042

TrEMBL top hits (Blast detail)Scoree value
B9HW26 Predicted protein6981e-071
A5B7Q8 Putative uncharacterized protein6749e-069
B9HJF6 Predicted protein6749e-069
Q45W76 Ubiquitin-conjugating enzyme 26632e-067
C6T394 Putative uncharacterized protein6622e-067

Arabidopsis top hits (Blast detail)Scoree value
AT1G23260.1 MMZ1 (MMS ZWEI HOMOLOGUE 1); protein binding / ubiquitin-protein ligase8143e-087
AT1G70660.1 MMZ2 (MMS ZWEI HOMOLOGE 2); protein binding / ubiquitin-protein ligase7202e-076
AT3G52560.1 UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4); protein binding / ubiquitin-protein ligase6172e-064
AT3G52560.2 UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4); protein binding / ubiquitin-protein ligase6055e-063
AT2G36060.1 ubiquitin-conjugating enzyme family protein5841e-060

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
115  15%
 
127  21%
 
69  27%
 
95  15%
 
103  9%
 
74  12%

Unigene MembersMember information