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Information for unigene UN22175

FASTA Sequence
Unigene ID: UN22175Length: 1220  SNP
GCTCGGTAACATCTTTAGTAGGAATGCGTTGTATAAAAGAAGATTTGCTTGTGAAACTATTCCAAAGGAGGTCCGAAAACTAGTAA
GCCAAAGATGTTTTTTATCCTTTGGGATATTCTTGCAATGCCACAATGGAAAAATGACAGTATTTCATAAGAAAAGATAGACGATA
ACACCAAAAACACCGTTTCACTAGATAAAGAGAGCTGAAGGTAACACAGACATTTCCTCATTCCAGCTTGATGCGGTCCATGTCGT
TTATCACACCTTCAAGCTTTGCAATCTGCCGCAAGAAGAAATCTCCATAACGCTTTGCAGGTTTTGATTCCACAACGTAGATCATG
TCATTGTTGATGTAGAAATCAATGTCTGCATTAGAGATGATCTTCCCATCAGAACCAACTGAATGTGTCTTGTGCTTGTATGTTAA
CAATATGGTCCTTAGAGTTGGTTCATCAACTTCCATGTAGTTTGCGAGCTTAGCAAGAGAGATGGAGGAGTAAACTTTAAGGAACG
TCCTCACTCCTGACAACAGCTGCTGCTGCTTCACCTCATAAAGGAACATCTTCAACTGAAGCCTGTAAGCATCCTGATTGTAATTG
ACAAGAGGCTCCTCGAAACTTGGTGCGGAAGGGGTGATGAACTTGGGGCATGCGTAAGAGAAGAGCTCGTCATAGATACCAAACGC
CTCATCGTCGTACCTCTGCATCCTCATCATCTTCTCACCGTACTTCTCACGCAACTGAGAGTTGACAGACTCGTCAACGAGCTTCG
TCTGAGGGCAGAGGGAGAGGCAAACCGCAAGCAAAGCATACATCTGCTCATTCTTCTTCAGCAACTGCTCATACTGAGGCGACTTT
TGATGGTACTGCTTCGTCTTGTAAATGTAGAGGAGGATCTTGTTGAACTCACGAACCGCATCCACGTACCTCCTCAACATGAGGTT
AGCGAATCCGTAGTGATAGATAGTAGCGATGTGGCATCCAATGACACTGGTGTAAACACCTTGCTGAGTGATGTCAATGGGCTGAA
GCCACTTGAGACCAGTATGGTAATCTCCCAAGAGGCAGTGAACACGGAGGAGACCGACCATGCTGAAGTAACCAAGGACCTTCAGC
ACGTTGCTTCCACCGCTGTAATCATACCCGTCGGTAGCAGTGAACTGCTCGAGCCCTTCCTTCTCCTGCTCAAGAATCTGGATGAT
GGTGGACTTCTCCACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885738 hypothetical protein ARALYDRAFT_319240 [Arabidopsis lyrata subsp. lyrata]16115e-177
XP_002872179 hypothetical protein ARALYDRAFT_489426 [Arabidopsis lyrata subsp. lyrata]16062e-176
NP_680222 RNA polymerase I-associated factor PAF67 [Arabidopsis thaliana]15802e-173
AAN31908 unknown protein [Arabidopsis thaliana]15802e-173
XP_002308615 predicted protein [Populus trichocarpa]15741e-172

Swiss-Prot top hits (Blast detail)Scoree value
A7SDW5 Eukaryotic translation initiation factor 3 subunit L7366e-077
Q3ZCK1 Eukaryotic translation initiation factor 3 subunit L7196e-075
Q7Q5Y8 Eukaryotic translation initiation factor 3 subunit L6561e-067
Q16FL6 Eukaryotic translation initiation factor 3 subunit L6417e-066
B0WR18 Eukaryotic translation initiation factor 3 subunit L6381e-065

TrEMBL top hits (Blast detail)Scoree value
Q8H152 Putative uncharacterized protein At5g2575415801e-173
B9H917 Predicted protein15747e-173
Q56XB4 Putative uncharacterized protein15739e-173
B9IKM1 Predicted protein15201e-166
C5XJP4 Putative uncharacterized protein Sb03g00092013703e-149

Arabidopsis top hits (Blast detail)Scoree value
AT5G25754.1 unknown protein15816e-176
AT5G25757.1 unknown protein15816e-176

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  7%
 
113  20%
 
121  7%
 
102  13%
 
84  27%
 
73  20%
 
181  7%

Unigene MembersMember information