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Information for unigene UN22180
| FASTA Sequence |
| Unigene ID: UN22180 | Length: 1669 |
| SNP | GCAATATGTTTTATTTTATTTTTTTGAAGAAGTCTCTGACTTGGAGGTAGTGAATAAAAGTCAAACTGTTGAATAGGTAGATTTAC
AGCAAAAGAAAGTAAAAAAAAAACTCATATGAGAGTATACATTTGTTCGCCTCATCAGAAGAGTGAGCTTCTTCTAAACGGTGACT
GCGATTGCTTCATCGAGAGCGATCACACCGGGAAGTACTTTACCTTCCAAGAGCTCCAAGCTAGCTCCACCACCAGTTGAGATATG
ACTCATGACTCCTGCAACTCCCACTTTCTCCACTGCAGCCACTGAGTCTCCTCCTCCTATTATCGTCGTCACTCCTTTCTCACTTA
GCTCTGCTAGTTTATTCGCAATGGCCTCAGTTCCAGCAGCAAACTTCTCCATCTCGAAAACTCCCATAGGTCCATTCCAAATGACT
GTCTGTGTTGTGTCCAAAGCTTCGTTGAATGTTTTAATCGAGTCTGGTCCAATGTCCAACCCCATCCATCCATCCTCAATCCCTGA
TGCAGACACAACCTTACTGTTGGCATCAGGAGCGAACTTGTCAGCAACCACAACGTCGGTTGGCAACAAAAGAGAGACTCCTTTGG
CCTTAGCTTTGGCGAGGAGTGATGTAGCCAACTCAAGCTTGTCTTCTTCAACTAAAGACGAACCAACAGAGAGACCCTGCGCCTTG
TAGAACGTAAAGATCATTCCACCACCAAGAAGAAGGATATCACACTTCTCAAGAAGCGATTCAATCACTCCAATCTTGGAGGAGAC
CTTGGAACCACCAACTATGGCTGCAAATGGTCTCTTTGGGCTTGAAACAGCACCCACAAGGTAATCAAGCTCCTTTTGGAGAAGGA
AACCAGCAACAGAAGGCTTCAAGAACTTTGTGACACCCTCAGTGGAAGCATGAGCTCTGTGAGCAGTTCCAAAAGCATCGTTGACG
TAGAGGTCAGCTAGTGAAGCAAGCTTCTTAGCGAACTCTGGATCGTTCTTCTCTTCTTCCTTGTAGAACCTGACGTTCTCAAGAAG
CAAAACTCCTCCGTCAGGTAGAGAAGCCACCAAGCTCTCAACTTCAGGACCGATACAGTCGTCAGCTTTCTTGACCTCAATACCAA
GAAGCTCAGATAGCCTAGGGACAAGAGGAGCCAAACTAAACTTCGGTGTTACTCCCTTTGGCCTTCCCAGATGAGTGGAGAGGATG
ACTTTGGCACCATTGTCGATCAAGTACTTGATCGTCGGAATAGCGGCACGGATCCTAGTATCGTCAGTGATCGTCTGACTGTCATC
GAGAGGTACATTGAGATCAGCTCTCACAAAAACCTTCTTCCCTTTCAGATCAGCAGAGGTGAGATCACCGACGCTCTTCTTCGCCA
TGGAAACAACTCCTCTGGTCCCTTTCCCGCGGAAAGACTGAACCTTCGAGGCGACATGGACGGCGAAACGTGAGTCTAGGACGGCG
GAGAAGCCTAGAGGACGGGTGGAGATGGATTTGGAGAGGATGGGGGAAAGGGAGGCGCGTGTGCGAGTTGCGGCGGAGGAAGAAGA
GGCTCCTCCGGTGGTTAACTTGAGGAGTGAGAAAGCTGGACTTGCGGCGACGGACGCCATGTGGGGGGTTGGGAGAAGAGGGAGAG
GATCGGGAGAGATTGAGAAGGAGAGGAGAGAGTGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187884 phosphoglycerate kinase 1 [Arabidopsis thaliana] | 2206 | 8e-246 |
| XP_002884926 hypothetical protein ARALYDRAFT_478641 [Arabidopsis lyrata subsp. lyrata] | 2204 | 1e-245 |
| XP_002891879 hypothetical protein ARALYDRAFT_474689 [Arabidopsis lyrata subsp. lyrata] | 2106 | 3e-234 |
| NP_176015 phosphoglycerate kinase [Arabidopsis thaliana] | 2086 | 7e-232 |
| XP_002513353 phosphoglycerate kinase, putative [Ricinus communis] | 1980 | 1e-219 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P50318 Phosphoglycerate kinase, chloroplastic | 2123 | 1e-237 |
| Q42961 Phosphoglycerate kinase, chloroplastic | 1915 | 2e-213 |
| P29409 Phosphoglycerate kinase, chloroplastic (Fragment) | 1898 | 2e-211 |
| P12782 Phosphoglycerate kinase, chloroplastic | 1883 | 1e-209 |
| P12783 Phosphoglycerate kinase, cytosolic | 1704 | 5e-189 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LD57 Phosphoglycerate kinase | 2206 | 5e-246 |
| Q9C7J4 Phosphoglycerate kinase | 2086 | 5e-232 |
| B9RHY4 Phosphoglycerate kinase | 1980 | 9e-220 |
| B9HY29 Phosphoglycerate kinase | 1960 | 2e-217 |
| A5CAF8 Phosphoglycerate kinase | 1948 | 5e-216 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G12780.1 PGK1 (PHOSPHOGLYCERATE KINASE 1); phosphoglycerate kinase | 2207 | 2e-248 |
| AT1G56190.1 phosphoglycerate kinase, putative | 2087 | 2e-234 |
| AT1G56190.2 phosphoglycerate kinase, putative | 1906 | 2e-213 |
| AT1G79550.1 PGK (PHOSPHOGLYCERATE KINASE); phosphoglycerate kinase | 1697 | 3e-189 |
| AT1G79550.2 PGK (PHOSPHOGLYCERATE KINASE); phosphoglycerate kinase | 1697 | 3e-189 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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