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Information for unigene UN22182
| FASTA Sequence |
| Unigene ID: UN22182 | Length: 1269 |
| SNP | GCTAAATTTGTAATTAGGCTTCTCAGCTAGTCCAAGGAGGCTAGAAAGATCAATTTTGTATTTACATCAAACTAGTTTAACTAGAT
AGCTTCACAATTTGGTTACTATTGTAACTAATTTTTGCTAATTTTATATTACATATGAGGGTTACATCATACATTGTAGCACTTAA
ACTTAATAAGGCCAATCATCCAATATTGCCCCACACAGCCAGCTTAACACCAAACCAACACAGCAACCAAAATTAACAAAACACCC
TTTCCTCTCACGATCGTGGACGCAAGGCTTCAAAATTCAGCCCATGAGCCACTTGACCAGCACAAGCAACCCACGGGTTAATTGGA
ACGGGTCGCTGATTGTGTTGATGGTTTGATGATGGCCCAGCCACACGCTCACACGAAGGACACATGATGAGTGTAGTCGGTGGAGT
CATTTGGCCATAGAACTGTGGAGACAGCTTGAGAGTTCGAAGCTCCATAGCCTCTTTCTGAAGTCGCCTATTCTCCTCCGTTAGTT
TCTCTACGCATCGTTTCAAGTATTCACAATCCACCTCCGTTTGCTTTAATTTGGTTCTAGCTCTTCTGTTCTGAAACCAGACTTCC
ACTTGTCTTGCTGTCAAGCTCAACTTCTTGGCCAAAGCTAGCTTCTGTTTGGGATTGAGAGTGTTGTGTTCTTTGAAAGTCTCTTC
AAGAAAAGCAGACTGATCTTTAGATAATCGGAGCTTCTTCCTCGAGGTTTCACCGCCGTCTTCTTCTTCGTCGGAGGTTCCACGCG
AGTAACCTCTATCCGGAGTGATATCATCGTGGTGGTCGGAGATTCCTTCTCTCTCACTCCTCTTCCCGCCGCTTATGGTGCTCGAG
ATCGTACTGTTAGGAGACGACACTCCTGCTTCCTCCTCGCAATCCACCGTTGTTGGAATACTGTTCACGTCTATTTTGCCAAGATC
TGATGAAGAAGCGAATGTTTGGTTCCATGGAAATCTAGGGAGATTGTTGGATATTGACGAGTTAGGATTCTGACTCAGCTGAAGAG
GTGTGTGATCTTGTGAAAGTCCTAAGCTCAGGCTCAAACCCAGATCTTCTTTTCTCATCATCATGACTTATTCTGTTCTTATGAAT
CTAGATGAGAACAGAGAGGATTTGATCTTTATGTGGAGAGAAAGAAATCAAGAAGAAAGATACAGATGAGAAATGGTATTTTTCTT
TTCTAAAGAGAGAGATCAGGTTTGTTGTGGCGAGTAGTAGTAAGGAGAGAGATGATGTGTGATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABD64984 homeobox-leucine zipper protein, putative [Brassica oleracea] | 1339 | 2e-145 |
| XP_002863347 hypothetical protein ARALYDRAFT_494245 [Arabidopsis lyrata subsp. lyrata] | 1267 | 4e-137 |
| NP_199548 homeobox-leucine zipper protein HAT2 [Arabidopsis thaliana] | 1266 | 6e-137 |
| AAA56901 homeobox protein [Arabidopsis thaliana] | 970 | 1e-102 |
| ABD65141 homeobox-leucine zipper protein hat1, putative [Brassica oleracea] | 970 | 1e-102 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P46601 Homeobox-leucine zipper protein HAT2 | 1266 | 2e-138 |
| P46600 Homeobox-leucine zipper protein HAT1 | 850 | 4e-090 |
| Q05466 Homeobox-leucine zipper protein HAT4 | 663 | 2e-068 |
| P46602 Homeobox-leucine zipper protein HAT3 | 608 | 5e-062 |
| P92953 Homeobox-leucine zipper protein ATHB-4 | 596 | 1e-060 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2A9S3 Homeobox-leucine zipper protein, putative | 1339 | 1e-145 |
| Q2A9A3 Homeobox-leucine zipper protein hat1, putative | 970 | 8e-103 |
| Q2A9C1 Homeobox-leucine zipper protein hat1, putative | 953 | 7e-101 |
| B9MUS1 Predicted protein | 837 | 2e-087 |
| B9GYL8 Predicted protein | 832 | 8e-087 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G47370.1 HAT2; DNA binding / transcription factor/ transcription repressor | 1267 | 2e-139 |
| AT4G17460.1 HAT1; DNA binding / transcription factor | 852 | 2e-091 |
| AT4G16780.1 ATHB-2 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2); DNA binding / protein homodimerization/ sequence-specific DNA binding / transcription factor | 664 | 1e-069 |
| AT3G60390.1 HAT3 (HOMEOBOX-LEUCINE ZIPPER PROTEIN 3); transcription factor | 608 | 4e-063 |
| AT2G44910.1 ATHB4 (ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4); DNA binding / transcription factor | 596 | 1e-061 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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