Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN22338

FASTA Sequence
Unigene ID: UN22338Length: 1025  SNP
GGAGATAGATTCGCAGACAAAAGAAAGAAGAAACCACTCTCTTTGCAGAAACAAGACCAACTTACTCTTGAATTCTCCACCATCAG
CTAACTAACAAGAAGCAGAAGGTAGGCTAATGGCGAAGATCAAGCCGCAAGCTCTATTGCAGCAAAGCAAGAAGAAGAAAGGACCT
TCTCCTATTAGCATAACCAGCATCGTGATTTACACCTTGGCCCTGCTTTTGGTCGTCTTCGTCCTCTTCTCCGCCTACAAACGTTG
GACCCTCAGATCTGAGATCCCAACCCACAATGGTAGATCACTTCTTCAGGATTCAGCCAAGACTACTAATGTCCCATGGTTTGCTA
CCTTAGATACGGGCAAAGGTTCAGTGACCATTGAACTGTTCAAAGATGCTGCTCCCAACGTTGTTGACGAATTCATCAACTTATGT
CAAGATGGGTATTTCAAAGGTTTCTTATTCAGCAGAGTTGTAAAGCATTCTGTCATTCAAGCTGGTCACTCTGCTGAGTCCGATGC
TGTCACTGATTGGGCTCTCCAAAAGACTAATCTTCATACCAGTTTAAAACAAGAAGAATTCATGGTGGGAACTCCTAAAGCTAAAA
ACCAGGAAGGAGGGTTTCAGTTTTTCATTGTATCTTCTCAGATCACAGATCTGAACGAGAAATTGACAGTTTTTGGTCGTGTTGCA
AAGGGACAAGATGTGGTTCAGGAGATCGAGGAGGTTGAGACAGATGAACATCATCAACCAAAAGCACCTATAGAGATCATGTCCGT
CACTTTGCTTCAAGACATGTGAAAGCTTTATTACTTCTTGTATTGAAAAAAATCTCTTGATGTATTAATGCTTTGTAACTTGAATT
CTTTTTTTCATCACCTCATTTGCAACTTTGTGGTAACACAACTTTTAATTTTCTATCTCCTGCATCGTCCTATTGTAGCTAGTAAA
CAGCATGTGACATTTAGAATATATTCTTTTAGACACATGCTACAACAATATTGTAAAAGCACTTGCAATCAATTATCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_182254 Peptidyl-prolyl cis-trans isomerase CYP21-3 [Arabidopsis thaliana]9483e-100
XP_002880294 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Arabidopsis lyrata subsp. lyrata]9295e-098
BAH57112 AT2G47320 [Arabidopsis thaliana]6714e-068
ACU17734 unknown [Glycine max]6052e-060
ACJ84137 unknown [Medicago truncatula]5943e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q94A16 Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial9481e-101
O74942 Peptidyl-prolyl cis-trans isomerase 91882e-013
P0C1J0 Peptidyl-prolyl cis-trans isomerase cyp151872e-013
Q09928 Peptidyl-prolyl cis-trans isomerase cyp81845e-013
P52017 Peptidyl-prolyl cis-trans isomerase 101792e-012

TrEMBL top hits (Blast detail)Scoree value
C0Z333 AT2G47320 protein6713e-068
C6T7D2 Putative uncharacterized protein6051e-060
B7FHA8 Putative uncharacterized protein5942e-059
B9HIP0 Predicted protein5782e-057
Q9C835 Putative uncharacterized protein At3g666545566e-055

Arabidopsis top hits (Blast detail)Scoree value
AT2G47320.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein9499e-103
AT3G66654.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein5563e-057
AT3G66654.3 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein5563e-057
AT3G66654.2 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein5563e-057
AT3G44600.1 CYP71 (CYCLOPHILIN71); chromatin binding / histone binding / peptidyl-prolyl cis-trans isomerase2275e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  11%
 
85  13%
 
1012  32%
 
125  13%
 
94  11%
 
115  13%
 
73  8%

Unigene MembersMember information