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Information for unigene UN22381
| FASTA Sequence |
| Unigene ID: UN22381 | Length: 1195 |
SSR | SNP | GGAACCAACCTCATCAACTAATCCACTACAATGTCTTCTTCTTATTCTTCACTCACACTCTTCTTCTTCTTCTTTGCTTCCACATT
CCTCTACACTTCATCAAACTCATTCAACATCACAAACATCTTAAACCAGAACAATGAGTTCTCCACTTTCAACAACCTCCTCTCCC
AAACCGGACTCGCTTCCACCATCAACTCCCGTCAAACCATAACCGTCCTCGCCCTTTCCAACGACGCAATGACAATGTTTTCCTCC
CAATCAACCGAAGACAACAAGAAAAGCCTCGGCCTCCACATCGTTCTAGACTACTACGACATCAAGAAACTCAGAAGCATAAAATC
AGTGATACTCACCACTCTCTTCCAAGCAAGCGGTCAAGCTAAAGGCCTGCAAGGGTTCGTGAACGCAACCGTTATGAACAACGGTG
ACATTATGTTCGGATCTGCGGTTCGTGGATCCGGCCTTGACTCTAAGCTTATAGACTCTGTTGCGACACATCCATATAACATCTCG
GTGCTTCATATTAGTAGTTACATATCTATCATGGATCCCGAAGGTCCTAAAGATCATGGTTCTTCATCTTCACCACTTCCTGTACA
ACCTCCTGGTGATGATGATTATGAATATGACGAGCCACCGTCTCCACCTTCCTCTACTACTAAGCCTTTTGTTGCTGCTGCTACTG
CTGCTACCGCTAAGCCACCTTCTTCTGCAAAAGACAACTCAACAACAAGTGGAGTTTCAGCGATTAGTATTCCTAGCTTGGCGTTT
GTGTCTGTGATCTCATCCTTTTGGTTCTTCATGACGGTCTGGTGATGTGATGGTTAAGATTTGATGAATAAACCAGATCAGCTTTC
TGAAAGCCAGAAAAAAAAATGGAGATTAGCAGCAAAGCTTTCAAGCTTTTTTTCACACAAAAGAACACTTCAAGCTTCACAAACTC
TATGGAATAAAGCAACAAAATCCAAAGAAGAAATAAAGTGATTGATGATATAATAAGGGATGAAGAATGTTGTAAAACTCAAAAGT
TCTTTATTTATTTGGAAGCTTGGATAAGTTTGTAAGAGATTTCAATTGGAACCAATAAAAGAAAACACAAACTTGCAACGCTTTTC
TGGTGCATTGTTTTTTGGTTGTATTACATGTAATAGAAGAGACAAAAGGAATGCAACACTAAAGATTAAAGATGTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABK28554 unknown [Arabidopsis thaliana] | 650 | 1e-065 |
| NP_187872 fasciclin-like arabinogalactan protein 14 [Arabidopsis thaliana] | 645 | 5e-065 |
| XP_002882785 hypothetical protein ARALYDRAFT_478625 [Arabidopsis lyrata subsp. lyrata] | 607 | 1e-060 |
| XP_002512774 Glycoprotein X precursor, putative [Ricinus communis] | 450 | 2e-042 |
| CAN66163 hypothetical protein VITISV_008126 [Vitis vinifera] | 436 | 9e-041 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LTW9 Fasciclin-like arabinogalactan protein 14 | 645 | 2e-066 |
| Q9LZX4 Fasciclin-like arabinogalactan protein 10 | 318 | 2e-028 |
| O22126 Fasciclin-like arabinogalactan protein 8 | 309 | 2e-027 |
| Q9ZQ23 Fasciclin-like arabinogalactan protein 3 | 301 | 2e-026 |
| Q9SU13 Fasciclin-like arabinogalactan protein 2 | 300 | 2e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A0MEV6 Putative uncharacterized protein (Fragment) | 650 | 9e-066 |
| B9RGR5 Glycoprotein X, putative | 450 | 1e-042 |
| A5BYV9 Putative uncharacterized protein | 436 | 6e-041 |
| B9GLR8 Fasciclin-like arabinogalactan protein family protein (Fragment) | 432 | 2e-040 |
| A5ATP0 Putative uncharacterized protein | 418 | 7e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G12660.1 FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR) | 650 | 5e-068 |
| AT3G60900.1 FLA10 | 318 | 2e-029 |
| AT2G45470.1 FLA8 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8) | 309 | 2e-028 |
| AT2G24450.1 FLA3 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR) | 303 | 9e-028 |
| AT4G12730.1 FLA2 (FASCICLIN-LIKE ARABINOGALACTAN 2) | 300 | 2e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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